0 Bedömningar

ID

45538

Beskrivning

Principal Investigator: Baylor Hopkins Center for Mendelian Genomics, Baylor College of Medicine, Houston, TX, USA MeSH: Mendelian Conditions,Alstrom Syndrome,Arrhythmogenic Right Ventricular Dysplasia,Syndactyly,Craniofacial Abnormalities,Neurofibromatoses,Ullrich congenital muscular dystrophy,Aortic Aneurysm, Thoracic,Rubinstein-Taybi Syndrome,Acne Inversa,Achondroplasia,Exostoses, Multiple Hereditary,Arthrogryposis, Renal Dysfunction, And Cholestasis,Van Den Ende-Gupta Syndrome,BO Syndrome 3,SMDCRD,Loeys-Dietz Syndrome, Type 1a,Cardiomyopathy, Dilated,OI, Type VI,Sotos Syndrome,Charcot-Marie-Tooth Disease,Microcephaly https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000711 The Centers for Mendelian Genomics project uses next-generation sequencing and computational approaches to discover the genes and variants that underlie Mendelian conditions. By discovering genes that cause Mendelian conditions, we will expand our understanding of their biology to facilitate diagnosis and new treatments.

Länk

dbGaP study = phs000711

Nyckelord

  1. 2022-12-29 2022-12-29 - Simon Heim
Rättsinnehavare

Baylor Hopkins Center for Mendelian Genomics, Baylor College of Medicine, Houston, TX, USA

Uppladdad den

29 december 2022

DOI

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Licens

Creative Commons BY 4.0

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    dbGaP phs000711 Baylor Hopkins Center for Mendelian Genomics (BH CMG)

    This sample attributes data table includes sample analyte type, name of condition, affection status for condition, and corresponding OMIM ID.

    pht003724
    Beskrivning

    pht003724

    Alias
    UMLS CUI [1,1]
    C3846158 (Other Coding)
    LOINC
    LA4728-7
    De-identified Sample ID
    Beskrivning

    SAMPID

    Datatyp

    string

    Alias
    UMLS CUI [1,1]
    C4684638 (De-identified Information)
    UMLS CUI [1,2]
    C1299222 (Sample identification number)
    SNOMED
    372274003
    Analyte Type
    Beskrivning

    ANALYTE_TYPE

    Datatyp

    string

    Alias
    UMLS CUI [1,1]
    C4744818 (Analyte Type)
    Name of disorder; presumed or confirmed.
    Beskrivning

    CONDITION

    Datatyp

    string

    Alias
    UMLS CUI [1,1]
    C0027365 (Name)
    SNOMED
    703503000
    LOINC
    LP72974-6
    UMLS CUI [1,2]
    C0012634 (Disease)
    SNOMED
    64572001
    LOINC
    LP21006-9
    UMLS CUI [1,3]
    C4684849 (Presumed)
    UMLS CUI [1,4]
    C0750484 (Confirmation)
    LOINC
    LA15290-2
    Case control status of the subject for particular condition when sample was collected
    Beskrivning

    AFFECTION_STATUS

    Datatyp

    text

    Alias
    UMLS CUI [1,1]
    C3274646 (Participant Case or Control Status)
    Phenotype ID from Online Mendelian Inheritance in Man
    Beskrivning

    OMIM_ID

    Datatyp

    text

    Alias
    UMLS CUI [1,1]
    C1285572 (Phenotype determination)
    SNOMED
    363778006
    UMLS CUI [1,2]
    C0600091 (Identifier)
    SNOMED
    118522005
    LOINC
    LP31795-5
    UMLS CUI [1,3]
    C0950133 (Online Mendelian Inheritance In Man)
    Tissues listed for subjects with more than one sample
    Beskrivning

    DNA_SOURCE

    Datatyp

    string

    Alias
    UMLS CUI [1,1]
    C0040300 (Body tissue)
    SNOMED
    85756007
    LOINC
    LP7641-6
    UMLS CUI [1,2]
    C0080105 (Research Subject)

    Similar models

    This sample attributes data table includes sample analyte type, name of condition, affection status for condition, and corresponding OMIM ID.

    Name
    Typ
    Description | Question | Decode (Coded Value)
    Datatyp
    Alias
    Item Group
    pht003724
    C3846158 (UMLS CUI [1,1])
    SAMPID
    Item
    De-identified Sample ID
    string
    C4684638 (UMLS CUI [1,1])
    C1299222 (UMLS CUI [1,2])
    ANALYTE_TYPE
    Item
    Analyte Type
    string
    C4744818 (UMLS CUI [1,1])
    CONDITION
    Item
    Name of disorder; presumed or confirmed.
    string
    C0027365 (UMLS CUI [1,1])
    C0012634 (UMLS CUI [1,2])
    C4684849 (UMLS CUI [1,3])
    C0750484 (UMLS CUI [1,4])
    Item
    Case control status of the subject for particular condition when sample was collected
    text
    C3274646 (UMLS CUI [1,1])
    Code List
    Case control status of the subject for particular condition when sample was collected
    CL Item
    Affected (1)
    C3274647 (UMLS CUI [1,1])
    CL Item
    Unaffected (2)
    C3274648 (UMLS CUI [1,1])
    CL Item
    Unknown (3)
    Item
    Phenotype ID from Online Mendelian Inheritance in Man
    text
    C1285572 (UMLS CUI [1,1])
    C0600091 (UMLS CUI [1,2])
    C0950133 (UMLS CUI [1,3])
    Code List
    Phenotype ID from Online Mendelian Inheritance in Man
    CL Item
    null (0)
    DNA_SOURCE
    Item
    Tissues listed for subjects with more than one sample
    string
    C0040300 (UMLS CUI [1,1])
    C0080105 (UMLS CUI [1,2])

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