ID

45538

Description

Principal Investigator: Baylor Hopkins Center for Mendelian Genomics, Baylor College of Medicine, Houston, TX, USA MeSH: Mendelian Conditions,Alstrom Syndrome,Arrhythmogenic Right Ventricular Dysplasia,Syndactyly,Craniofacial Abnormalities,Neurofibromatoses,Ullrich congenital muscular dystrophy,Aortic Aneurysm, Thoracic,Rubinstein-Taybi Syndrome,Acne Inversa,Achondroplasia,Exostoses, Multiple Hereditary,Arthrogryposis, Renal Dysfunction, And Cholestasis,Van Den Ende-Gupta Syndrome,BO Syndrome 3,SMDCRD,Loeys-Dietz Syndrome, Type 1a,Cardiomyopathy, Dilated,OI, Type VI,Sotos Syndrome,Charcot-Marie-Tooth Disease,Microcephaly https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000711 The Centers for Mendelian Genomics project uses next-generation sequencing and computational approaches to discover the genes and variants that underlie Mendelian conditions. By discovering genes that cause Mendelian conditions, we will expand our understanding of their biology to facilitate diagnosis and new treatments.

Link

dbGaP study = phs000711

Keywords

  1. 12/29/22 12/29/22 - Simon Heim
Copyright Holder

Baylor Hopkins Center for Mendelian Genomics, Baylor College of Medicine, Houston, TX, USA

Uploaded on

December 29, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000711 Baylor Hopkins Center for Mendelian Genomics (BH CMG)

This sample attributes data table includes sample analyte type, name of condition, affection status for condition, and corresponding OMIM ID.

pht003724
Description

pht003724

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Analyte Type
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
Name of disorder; presumed or confirmed.
Description

CONDITION

Data type

string

Alias
UMLS CUI [1,1]
C0027365
UMLS CUI [1,2]
C0012634
UMLS CUI [1,3]
C4684849
UMLS CUI [1,4]
C0750484
Case control status of the subject for particular condition when sample was collected
Description

AFFECTION_STATUS

Data type

text

Alias
UMLS CUI [1,1]
C3274646
Phenotype ID from Online Mendelian Inheritance in Man
Description

OMIM_ID

Data type

text

Alias
UMLS CUI [1,1]
C1285572
UMLS CUI [1,2]
C0600091
UMLS CUI [1,3]
C0950133
Tissues listed for subjects with more than one sample
Description

DNA_SOURCE

Data type

string

Alias
UMLS CUI [1,1]
C0040300
UMLS CUI [1,2]
C0080105

Similar models

This sample attributes data table includes sample analyte type, name of condition, affection status for condition, and corresponding OMIM ID.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht003724
C3846158 (UMLS CUI [1,1])
SAMPID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
CONDITION
Item
Name of disorder; presumed or confirmed.
string
C0027365 (UMLS CUI [1,1])
C0012634 (UMLS CUI [1,2])
C4684849 (UMLS CUI [1,3])
C0750484 (UMLS CUI [1,4])
Item
Case control status of the subject for particular condition when sample was collected
text
C3274646 (UMLS CUI [1,1])
Code List
Case control status of the subject for particular condition when sample was collected
CL Item
Affected (1)
C3274647 (UMLS CUI [1,1])
CL Item
Unaffected (2)
C3274648 (UMLS CUI [1,1])
CL Item
Unknown (3)
Item
Phenotype ID from Online Mendelian Inheritance in Man
text
C1285572 (UMLS CUI [1,1])
C0600091 (UMLS CUI [1,2])
C0950133 (UMLS CUI [1,3])
Code List
Phenotype ID from Online Mendelian Inheritance in Man
CL Item
null (0)
DNA_SOURCE
Item
Tissues listed for subjects with more than one sample
string
C0040300 (UMLS CUI [1,1])
C0080105 (UMLS CUI [1,2])

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