ID

45526

Description

Principal Investigator: Aagaard, Kjersti, M.D., Ph.D, Baylor College of Medicine, Houston, TX, USA MeSH: Bacterial Infections https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000735 This study is to investigate placental microbiome through 16S rDNA-based and whole genome shotgun metagenomic sequencing. Identified taxa and their gene carriage patterns were compared to other human body sites niches. The placental microbiome profiles were most akin to the human oral microbiome.

Link

dbGaP study = phs000735

Keywords

  1. 12/20/22 12/20/22 - Simon Heim
Copyright Holder

Aagaard, Kjersti, M.D., Ph.D, Baylor College of Medicine, Houston, TX, USA

Uploaded on

December 20, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000735 The Placenta Harbors a Unique Microbiome

Subject - Sample Mapping

pht003796
Description

pht003796

Alias
UMLS CUI [1,1]
C3846158 (Other Coding)
LOINC
LA4728-7
Subject ID
Description

SUBJECT_ID

Data type

string

Alias
UMLS CUI [1,1]
C2348585 (Clinical Trial Subject Unique Identifier)
Sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C1299222 (Sample identification number)
SNOMED
372274003
Sample Use
Description

SAMPLE_USE

Data type

text

Alias
UMLS CUI [1,1]
C2347026 (Biospecimen)
UMLS CUI [1,2]
C1524063 (Use of)
SNOMED
260676000

Similar models

Subject - Sample Mapping

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht003796
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
SAMPLE_ID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
Item
Sample Use
text
C2347026 (UMLS CUI [1,1])
C1524063 (UMLS CUI [1,2])
Code List
Sample Use
CL Item
Whole genome sequencing (WGS_SRA)
C3640076 (UMLS CUI [1,1])

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