ID
45524
Descrizione
Principal Investigator: Sanford Simon, PhD, The Rockefeller University, New York, NY, USA MeSH: Fibrolamellar hepatocellular carcinoma,Carcinoma, Hepatocellular https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000709 Fibrolamellar hepatocellular carcinoma (FL-HCC) is a rare liver tumor primarily affecting adolescents and young adults. Little is known of the molecular pathogenesis. To characterize the disease we performed RNA sequencing and whole genome sequencing on FL-HCC tumors and adjacent normal tissue. The results demonstrate few consistent differences on the chromosomal level and many hundreds of alterations in the expression of RNA transcripts.
collegamento
Keywords
versioni (1)
- 14/12/22 14/12/22 - Simon Heim
Titolare del copyright
Sanford Simon, PhD, The Rockefeller University, New York, NY, USA
Caricato su
14 dicembre 2022
DOI
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Licenza
Creative Commons BY 4.0
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dbGaP phs000709 The Genome and Transcriptome of Fibrolamellar Hepatocellular Carcinoma
Eligibility Criteria
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent data table contains subject IDs and consent information.
- The subject sample mapping data table contains mapping of study subject IDs to sample IDs. dbGaP samples are defined as the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
- This sample attributes table includes body site where sample was extracted, analyte type, histological type, sample type, genotyping center, and sequencing center.
Similar models
Eligibility Criteria
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent data table contains subject IDs and consent information.
- The subject sample mapping data table contains mapping of study subject IDs to sample IDs. dbGaP samples are defined as the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
- This sample attributes table includes body site where sample was extracted, analyte type, histological type, sample type, genotyping center, and sequencing center.
C0680251 (UMLS CUI [1,2])
C0079399 (UMLS CUI [1,2])
C0001779 (UMLS CUI [1,3])
C0205462 (UMLS CUI [1,4])
C1711411 (UMLS CUI [1,5])
C0334287 (UMLS CUI [1,6])
C0205307 (UMLS CUI [1,7])
C0736268 (UMLS CUI [1,8])
C1512693 (UMLS CUI [1,9])