ID
45524
Description
Principal Investigator: Sanford Simon, PhD, The Rockefeller University, New York, NY, USA MeSH: Fibrolamellar hepatocellular carcinoma,Carcinoma, Hepatocellular https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000709 Fibrolamellar hepatocellular carcinoma (FL-HCC) is a rare liver tumor primarily affecting adolescents and young adults. Little is known of the molecular pathogenesis. To characterize the disease we performed RNA sequencing and whole genome sequencing on FL-HCC tumors and adjacent normal tissue. The results demonstrate few consistent differences on the chromosomal level and many hundreds of alterations in the expression of RNA transcripts.
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Versions (1)
- 14/12/2022 14/12/2022 - Simon Heim
Détendeur de droits
Sanford Simon, PhD, The Rockefeller University, New York, NY, USA
Téléchargé le
14 décembre 2022
DOI
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Licence
Creative Commons BY 4.0
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dbGaP phs000709 The Genome and Transcriptome of Fibrolamellar Hepatocellular Carcinoma
Eligibility Criteria
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent data table contains subject IDs and consent information.
- The subject sample mapping data table contains mapping of study subject IDs to sample IDs. dbGaP samples are defined as the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
- This sample attributes table includes body site where sample was extracted, analyte type, histological type, sample type, genotyping center, and sequencing center.
Similar models
Eligibility Criteria
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent data table contains subject IDs and consent information.
- The subject sample mapping data table contains mapping of study subject IDs to sample IDs. dbGaP samples are defined as the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
- This sample attributes table includes body site where sample was extracted, analyte type, histological type, sample type, genotyping center, and sequencing center.
C0680251 (UMLS CUI [1,2])
C0079399 (UMLS CUI [1,2])
C0001779 (UMLS CUI [1,3])
C0205462 (UMLS CUI [1,4])
C1711411 (UMLS CUI [1,5])
C0334287 (UMLS CUI [1,6])
C0205307 (UMLS CUI [1,7])
C0736268 (UMLS CUI [1,8])
C1512693 (UMLS CUI [1,9])