ID

45523

Description

Principal Investigator: Qing Lan, MD, PhD, MPH, National Institutes of Health, Bethesda, MD, USA MeSH: Lung Neoplasms,Adenocarcinoma,Squamous Cell Carcinoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000716 To learn about the etiology of lung cancer among never-smoking women in Asia, we formed the Female Lung Cancer Consortium in Asia (FLCCA), which includes studies of lung cancer in Eastern Asia and conducted a GWAS. We analyzed a total of 5510 lung cancer cases and 4544 controls and identified 3 novel loci (Lan et al., 2012). Of these study subjects, 4922 lung cancer cases and 3959 controls are available for posting. Lan et al.., Genome-wide association analysis identifies new lung cancer susceptibility loci in never-smoking women in Asia. Nat Genet. 2012 Dec;44(12):1330-5. doi: 10.1038/ng.2456. Epub 2012 Nov 11. PubMed PMID: 23143601.

Link

dbGaP study = phs000716

Keywords

  1. 12/14/22 12/14/22 - Simon Heim
Copyright Holder

Qing Lan, MD, PhD, MPH, National Institutes of Health, Bethesda, MD, USA

Uploaded on

December 14, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000716 GWAS of Lung Cancer Susceptibility in Never-Smoking Women in Asia

Sample ID, body site where sample was obtained, analyte type, and tumor status of samples associated with participants with or without lung cancer and involved in the "Genome-Wide Association Study of Lung Cancer Susceptibility in Never-Smoking Women in Asia" project.

pht003708
Description

pht003708

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Description

SAMPID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected [WHOLE BLOOD, BUCCAL, UNKNOWN]
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
UMLS CUI [1,2]
C4319839
UMLS CUI [1,3]
C1608383
UMLS CUI [1,4]
C0439673
Analyte type [DNA]
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
UMLS CUI [1,2]
C0012854
Tumor status
Description

IS_TUMOR

Data type

text

Alias
UMLS CUI [1,1]
C0475752

Similar models

Sample ID, body site where sample was obtained, analyte type, and tumor status of samples associated with participants with or without lung cancer and involved in the "Genome-Wide Association Study of Lung Cancer Susceptibility in Never-Smoking Women in Asia" project.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht003708
C3846158 (UMLS CUI [1,1])
SAMPID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected [WHOLE BLOOD, BUCCAL, UNKNOWN]
string
C0449705 (UMLS CUI [1,1])
C4319839 (UMLS CUI [1,2])
C1608383 (UMLS CUI [1,3])
C0439673 (UMLS CUI [1,4])
ANALYTE_TYPE
Item
Analyte type [DNA]
string
C4744818 (UMLS CUI [1,1])
C0012854 (UMLS CUI [1,2])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
Code List
Tumor status
CL Item
Is not a tumor (NO)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is Tumor (YES)
C0027651 (UMLS CUI [1,1])

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