ID

45513

Descrizione

Principal Investigator: Sami N. Malek, MD, University of Michigan Department of Internal Medicine, Division of Hematology-Oncology, Ann Arbor, MI, USA MeSH: Lymphoma, Follicular,Lymphoma, Non-Hodgkin https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000729 A cohort of follicular lymphoma cases had tumor cells purified from tissue samples after informed consent using flow cytometry. DNA was extracted from the cells, and samples were subjected to solution-based exome capture using the Illumina TruSeq Exome Enrichment Kit and the Illumina HiSeq 2000 platform.

collegamento

dbGaP study = phs000729

Keywords

  1. 13/12/22 13/12/22 - Simon Heim
Titolare del copyright

Sami N. Malek, MD, University of Michigan Department of Internal Medicine, Division of Hematology-Oncology, Ann Arbor, MI, USA

Caricato su

13 dicembre 2022

DOI

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Licenza

Creative Commons BY 4.0

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dbGaP phs000729 Follicular Lymphoma 2013 - Malek

Sample ID, body site where sample was obtained, analyte type, tumor status of sample, histological type of cancer, and method for tumor and normal cell purification of participants with follicular lymphoma and involved in the "Solution-based exome capture and HiSeq2000-based massively parallel sequencing of Follicular Lymphoma" project.

pht003776
Descrizione

pht003776

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Descrizione

SAMPLE_ID

Tipo di dati

text

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Descrizione

BODY_SITE

Tipo di dati

string

Alias
UMLS CUI [1,1]
C0449705
Analyte type
Descrizione

ANALYTE_TYPE

Tipo di dati

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Descrizione

IS_TUMOR

Tipo di dati

string

Alias
UMLS CUI [1,1]
C0475752
Immunophenotypic definition of cells from which DNA was extracted
Descrizione

HISTOLOGICAL_TYPE

Tipo di dati

string

Alias
UMLS CUI [1,1]
C4745253
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C0007634
UMLS CUI [1,4]
C0185115
UMLS CUI [1,5]
C0012854
Instrumentation method for tumor or normal cell purification
Descrizione

SOURCE_CELLULAR_DNA

Tipo di dati

string

Alias
UMLS CUI [1,1]
C0587378
UMLS CUI [1,2]
C0025663
UMLS CUI [1,3]
C0027651
UMLS CUI [1,4]
C1268443
UMLS CUI [1,5]
C1998793

Similar models

Sample ID, body site where sample was obtained, analyte type, tumor status of sample, histological type of cancer, and method for tumor and normal cell purification of participants with follicular lymphoma and involved in the "Solution-based exome capture and HiSeq2000-based massively parallel sequencing of Follicular Lymphoma" project.

Name
genere
Description | Question | Decode (Coded Value)
Tipo di dati
Alias
Item Group
pht003776
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified sample ID
text
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte type
string
C4744818 (UMLS CUI [1,1])
IS_TUMOR
Item
Tumor status
string
C0475752 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
Immunophenotypic definition of cells from which DNA was extracted
string
C4745253 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C0007634 (UMLS CUI [1,3])
C0185115 (UMLS CUI [1,4])
C0012854 (UMLS CUI [1,5])
SOURCE_CELLULAR_DNA
Item
Instrumentation method for tumor or normal cell purification
string
C0587378 (UMLS CUI [1,1])
C0025663 (UMLS CUI [1,2])
C0027651 (UMLS CUI [1,3])
C1268443 (UMLS CUI [1,4])
C1998793 (UMLS CUI [1,5])

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