ID

45513

Beskrivning

Principal Investigator: Sami N. Malek, MD, University of Michigan Department of Internal Medicine, Division of Hematology-Oncology, Ann Arbor, MI, USA MeSH: Lymphoma, Follicular,Lymphoma, Non-Hodgkin https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000729 A cohort of follicular lymphoma cases had tumor cells purified from tissue samples after informed consent using flow cytometry. DNA was extracted from the cells, and samples were subjected to solution-based exome capture using the Illumina TruSeq Exome Enrichment Kit and the Illumina HiSeq 2000 platform.

Länk

dbGaP study = phs000729

Nyckelord

  1. 2022-12-13 2022-12-13 - Simon Heim
Rättsinnehavare

Sami N. Malek, MD, University of Michigan Department of Internal Medicine, Division of Hematology-Oncology, Ann Arbor, MI, USA

Uppladdad den

13 december 2022

DOI

För en begäran logga in.

Licens

Creative Commons BY 4.0

Modellkommentarer :

Här kan du kommentera modellen. Med hjälp av pratbubblor i Item-grupperna och Item kan du lägga in specifika kommentarer.

Itemgroup-kommentar för :

Item-kommentar för :


Inga kommentarer

Du måste vara inloggad för att kunna ladda ner formulär. Var vänlig logga in eller registrera dig utan kostnad.

dbGaP phs000729 Follicular Lymphoma 2013 - Malek

Sample ID, body site where sample was obtained, analyte type, tumor status of sample, histological type of cancer, and method for tumor and normal cell purification of participants with follicular lymphoma and involved in the "Solution-based exome capture and HiSeq2000-based massively parallel sequencing of Follicular Lymphoma" project.

pht003776
Beskrivning

pht003776

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Beskrivning

SAMPLE_ID

Datatyp

text

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Beskrivning

BODY_SITE

Datatyp

string

Alias
UMLS CUI [1,1]
C0449705
Analyte type
Beskrivning

ANALYTE_TYPE

Datatyp

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Beskrivning

IS_TUMOR

Datatyp

string

Alias
UMLS CUI [1,1]
C0475752
Immunophenotypic definition of cells from which DNA was extracted
Beskrivning

HISTOLOGICAL_TYPE

Datatyp

string

Alias
UMLS CUI [1,1]
C4745253
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C0007634
UMLS CUI [1,4]
C0185115
UMLS CUI [1,5]
C0012854
Instrumentation method for tumor or normal cell purification
Beskrivning

SOURCE_CELLULAR_DNA

Datatyp

string

Alias
UMLS CUI [1,1]
C0587378
UMLS CUI [1,2]
C0025663
UMLS CUI [1,3]
C0027651
UMLS CUI [1,4]
C1268443
UMLS CUI [1,5]
C1998793

Similar models

Sample ID, body site where sample was obtained, analyte type, tumor status of sample, histological type of cancer, and method for tumor and normal cell purification of participants with follicular lymphoma and involved in the "Solution-based exome capture and HiSeq2000-based massively parallel sequencing of Follicular Lymphoma" project.

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
pht003776
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified sample ID
text
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte type
string
C4744818 (UMLS CUI [1,1])
IS_TUMOR
Item
Tumor status
string
C0475752 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
Immunophenotypic definition of cells from which DNA was extracted
string
C4745253 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C0007634 (UMLS CUI [1,3])
C0185115 (UMLS CUI [1,4])
C0012854 (UMLS CUI [1,5])
SOURCE_CELLULAR_DNA
Item
Instrumentation method for tumor or normal cell purification
string
C0587378 (UMLS CUI [1,1])
C0025663 (UMLS CUI [1,2])
C0027651 (UMLS CUI [1,3])
C1268443 (UMLS CUI [1,4])
C1998793 (UMLS CUI [1,5])

Använd detta formulär för feedback, frågor och förslag på förbättringar.

Fält markerade med * är obligatoriska.

Do you need help on how to use the search function? Please watch the corresponding tutorial video for more details and learn how to use the search function most efficiently.

Watch Tutorial