ID

45509

Descrizione

Principal Investigator: Marie-Claude Gingras, PhD, Baylor College of Medicine, Human Genome Sequencing Center, Houston, TX, USA MeSH: Carcinoma, Hepatocellular https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000509 Hepatocellular carcinoma (HCC) accounts for 85-90% of primary liver cancers. We have focused on three major HCC etiologies:hepatitis C virus (HCV), hepatitis B virus (HBV), and nonviral causes. The onset and progression of cancer is driven by extensive rearrangement and mutation of the genome. We combined our capability to capture and enrich exome DNA with the next generation sequencing capacity to allow us to detect and characterize the somatic mutation profile of patients with HCC. Patient samples were collected by the Liver Center, Division of Abdominal Transplantation in the Baylor College of Medicine Department of Surgery. Sequencing of HCC is one of the NHGRI Center Initiated Projects in progress in the Human Genome Sequencing Center at Baylor College of Medicine.

collegamento

dbGap study = phs000509

Keywords

  1. 14/10/22 14/10/22 - Chiara Middel
  2. 13/12/22 13/12/22 - Kristina Keller
Titolare del copyright

Marie-Claude Gingras, PhD, Baylor College of Medicine, Human Genome Sequencing Center, Houston, TX, USA

Caricato su

13 dicembre 2022

DOI

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Licenza

Creative Commons BY 4.0

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    dbGaP phs000509 Genome Sequencing of Hepatocellular Carcinoma

    Eligibility Criteria

    Inclusion and exclusion criteria
    Descrizione

    Inclusion and exclusion criteria

    All patients with tumors at the time of transplants. Informed consent for participation in genomic research is required.
    Descrizione

    Elig.phs000509.v1.p1.1

    Tipo di dati

    boolean

    Alias
    UMLS CUI [1,1]
    C0027651 (Neoplasms)
    SNOMED
    108369006
    UMLS CUI [1,2]
    C0011008 (Date in time)
    SNOMED
    410671006
    UMLS CUI [1,3]
    C0040732 (Transplantation)
    SNOMED
    263903005
    LOINC
    LA18638-9
    UMLS CUI [2,1]
    C0021430 (Informed Consent)
    UMLS CUI [2,2]
    C0679823 (Participation)
    UMLS CUI [2,3]
    C0887950 (Genomics)
    UMLS CUI [2,4]
    C0035168 (research)

    Similar models

    Eligibility Criteria

    Name
    genere
    Description | Question | Decode (Coded Value)
    Tipo di dati
    Alias
    Item Group
    Inclusion and exclusion criteria
    Elig.phs000509.v1.p1.1
    Item
    All patients with tumors at the time of transplants. Informed consent for participation in genomic research is required.
    boolean
    C0027651 (UMLS CUI [1,1])
    C0011008 (UMLS CUI [1,2])
    C0040732 (UMLS CUI [1,3])
    C0021430 (UMLS CUI [2,1])
    C0679823 (UMLS CUI [2,2])
    C0887950 (UMLS CUI [2,3])
    C0035168 (UMLS CUI [2,4])

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