ID

45474

Descripción

Principal Investigator: E. Ann Coleman, University of Arkansas for Medical Sciences Little Rock, Arkansas, USA MeSH: Multiple Myeloma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000545 We hypothesized that genetic variability in the enzymes/proteins involved in drug metabolism, inflammation, and immune function is a major underlying contributor to mucositis incidence and progression and that, based on this variability we can identify variants that influence risk, and develop a mucositis progression prediction model that improves on existing models by incorporating genetic variability along with clinical factors. Using genome wide association study (GWAS) combined with a pathway candidate gene approach and a modified case-control study method, we investigated the hypothesis in a sample of 1092 patients who received a myeloablative dose of melphalan (MEL) followed by autologous hematopoietic stem cell (ASCT) transplantation as treatment for multiple myeloma and for whom banked blood stem cell samples and clinical data were available.

Link

dbGap study = phs000545

Palabras clave

  1. 31/10/22 31/10/22 - Simon Heim
  2. 13/12/22 13/12/22 - Kristina Keller
Titular de derechos de autor

E. Ann Coleman, University of Arkansas for Medical Sciences Little Rock, Arkansas, USA

Subido en

13 de diciembre de 2022

DOI

Para solicitar uno, por favor iniciar sesión.

Licencia

Creative Commons BY 4.0

Comentarios del modelo :

Puede comentar sobre el modelo de datos aquí. A través de las burbujas de diálogo en los grupos de elementos y elementos, puede agregar comentarios específicos.

Comentarios de grupo de elementos para :

Comentarios del elemento para :


Sin comentarios

Para descargar modelos de datos, debe haber iniciado sesión. Por favor iniciar sesión o Registrate gratis.

dbGaP phs000545 Predicting Chemotherapy-Induced Mucositis with Genetic and Clinical Factors

Subject ID, age, type of cancer, BMI, body surface area, weight, gender, race, hematocrit, hemoglobin, GFR, creatinine, albumin, c-reactive protein, Melphelan dose, beta-microglobulin, myeloma isotype, mucositis grade, and CMV of participants involved in the "Predicting Chemotherapy-Induced Mucositis with Genetic and Clinical Factors" project.

pht003764
Descripción

pht003764

De-identified ID
Descripción

PublicID

Tipo de datos

text

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Age at treatment (years)
Descripción

age

Tipo de datos

text

Unidades de medida
  • Years
Alias
UMLS CUI [1,1]
C4085942
Years
Type of cancer
Descripción

cancertype

Tipo de datos

string

Alias
UMLS CUI [1,1]
C4743729
Body Mass Index (kg/m**2)
Descripción

bmi

Tipo de datos

float

Unidades de medida
  • kg/m**2
Alias
UMLS CUI [1,1]
C1305855
kg/m**2
Body surface area (m**2)
Descripción

bsa

Tipo de datos

float

Unidades de medida
  • m**2
Alias
UMLS CUI [1,1]
C0005902
m**2
Weight (kgs)
Descripción

wt_kg

Tipo de datos

float

Unidades de medida
  • kg
Alias
UMLS CUI [1,1]
C0005910
kg
Gender
Descripción

gender

Tipo de datos

string

Alias
UMLS CUI [1,1]
C0079399
Race
Descripción

race

Tipo de datos

string

Alias
UMLS CUI [1,1]
C0034510
Hematocrit (%)
Descripción

hct

Tipo de datos

float

Unidades de medida
  • %
Alias
UMLS CUI [1,1]
C0518014
%
Hemoglobin (g/dL)
Descripción

hb

Tipo de datos

float

Unidades de medida
  • g/dL
Alias
UMLS CUI [1,1]
C0019046
UMLS CUI [1,2]
C1274040
UMLS CUI [1,3]
C0022885
UMLS CUI [1,4]
C1522609
g/dL
Estimated GFR (ml/min)
Descripción

est_gfr

Tipo de datos

float

Unidades de medida
  • ml/min
Alias
UMLS CUI [1,1]
C3811844
ml/min
Serum creatinine (mg/dL)
Descripción

cr

Tipo de datos

float

Unidades de medida
  • mg/dL
Alias
UMLS CUI [1,1]
C0600061
mg/dL
Creatinine Clearance (ml/min)
Descripción

crcl

Tipo de datos

float

Unidades de medida
  • ml/min
Alias
UMLS CUI [1,1]
C0373595
ml/min
Albumin (g/dL)
Descripción

alb

Tipo de datos

float

Unidades de medida
  • g/dL
Alias
UMLS CUI [1,1]
C0363885
g/dL
C-reactive protein (mg/L)
Descripción

crp

Tipo de datos

float

Unidades de medida
  • mg/L
Alias
UMLS CUI [1,1]
C0006560
mg/L
Melphelan dose (mg/kg)
Descripción

mg_kg

Tipo de datos

float

Unidades de medida
  • mg/kg
Alias
UMLS CUI [1,1]
C0025241
UMLS CUI [1,2]
C3174092
mg/kg
Beta-microglobulin
Descripción

b2m

Tipo de datos

float

Alias
UMLS CUI [1,1]
C0201910
Myeloma Isotype
Descripción

isotype

Tipo de datos

string

Alias
UMLS CUI [1,1]
C0026764
UMLS CUI [1,2]
C0021017
Upper GI mucositis grade
Descripción

ugr

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0521585
UMLS CUI [1,2]
C3203348
Lower GI mucositis grade
Descripción

lgr

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0521585
UMLS CUI [1,2]
C0226875
Presence of C. difficile
Descripción

cdiff

Tipo de datos

string

Alias
UMLS CUI [1,1]
C4687402
CMV reactive
Descripción

cmv_rea

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0010825
UMLS CUI [1,2]
C0205332
CMV serostatus
Descripción

cmv_sero

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0582172
Upper GI mucositis case control
Descripción

case_control_upperGI

Tipo de datos

text

Alias
UMLS CUI [1,1]
C3203348
UMLS CUI [1,2]
C0521585
UMLS CUI [1,3]
C0872128
Lower GI mucositis case control
Descripción

case_control_lowerGI

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0226875
UMLS CUI [1,2]
C0521585
UMLS CUI [1,3]
C0872128

Similar models

Subject ID, age, type of cancer, BMI, body surface area, weight, gender, race, hematocrit, hemoglobin, GFR, creatinine, albumin, c-reactive protein, Melphelan dose, beta-microglobulin, myeloma isotype, mucositis grade, and CMV of participants involved in the "Predicting Chemotherapy-Induced Mucositis with Genetic and Clinical Factors" project.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht003764
PublicID
Item
De-identified ID
text
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
age
Item
Age at treatment (years)
text
C4085942 (UMLS CUI [1,1])
cancertype
Item
Type of cancer
string
C4743729 (UMLS CUI [1,1])
bmi
Item
Body Mass Index (kg/m**2)
float
C1305855 (UMLS CUI [1,1])
bsa
Item
Body surface area (m**2)
float
C0005902 (UMLS CUI [1,1])
wt_kg
Item
Weight (kgs)
float
C0005910 (UMLS CUI [1,1])
gender
Item
Gender
string
C0079399 (UMLS CUI [1,1])
race
Item
Race
string
C0034510 (UMLS CUI [1,1])
hct
Item
Hematocrit (%)
float
C0518014 (UMLS CUI [1,1])
hb
Item
Hemoglobin (g/dL)
float
C0019046 (UMLS CUI [1,1])
C1274040 (UMLS CUI [1,2])
C0022885 (UMLS CUI [1,3])
C1522609 (UMLS CUI [1,4])
est_gfr
Item
Estimated GFR (ml/min)
float
C3811844 (UMLS CUI [1,1])
cr
Item
Serum creatinine (mg/dL)
float
C0600061 (UMLS CUI [1,1])
crcl
Item
Creatinine Clearance (ml/min)
float
C0373595 (UMLS CUI [1,1])
alb
Item
Albumin (g/dL)
float
C0363885 (UMLS CUI [1,1])
crp
Item
C-reactive protein (mg/L)
float
C0006560 (UMLS CUI [1,1])
mg_kg
Item
Melphelan dose (mg/kg)
float
C0025241 (UMLS CUI [1,1])
C3174092 (UMLS CUI [1,2])
b2m
Item
Beta-microglobulin
float
C0201910 (UMLS CUI [1,1])
isotype
Item
Myeloma Isotype
string
C0026764 (UMLS CUI [1,1])
C0021017 (UMLS CUI [1,2])
ugr
Item
Upper GI mucositis grade
text
C0521585 (UMLS CUI [1,1])
C3203348 (UMLS CUI [1,2])
lgr
Item
Lower GI mucositis grade
text
C0521585 (UMLS CUI [1,1])
C0226875 (UMLS CUI [1,2])
cdiff
Item
Presence of C. difficile
string
C4687402 (UMLS CUI [1,1])
Item
CMV reactive
text
C0010825 (UMLS CUI [1,1])
C0205332 (UMLS CUI [1,2])
Code List
CMV reactive
CL Item
Not done (ND)
CL Item
Negative (NEG)
CL Item
Positive (POS)
Item
CMV serostatus
text
C0582172 (UMLS CUI [1,1])
Code List
CMV serostatus
CL Item
Negative (NEG)
CL Item
Positive (POS)
case_control_upperGI
Item
Upper GI mucositis case control
text
C3203348 (UMLS CUI [1,1])
C0521585 (UMLS CUI [1,2])
C0872128 (UMLS CUI [1,3])
case_control_lowerGI
Item
Lower GI mucositis case control
text
C0226875 (UMLS CUI [1,1])
C0521585 (UMLS CUI [1,2])
C0872128 (UMLS CUI [1,3])

Do you need help on how to use the search function? Please watch the corresponding tutorial video for more details and learn how to use the search function most efficiently.

Watch Tutorial