ID

45473

Description

Principal Investigator: Laura Pasqualucci, MD, Institute for Cancer Genetics, Columbia University, New York, NY, USA MeSH: Lymphoma, Non-Hodgkin,Lymphoma, B-Cell https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000502 Splenic Marginal Zone Lymphoma (SMZL) is a B-cell malignancy of unknown pathogenesis and thus orphan of targeted therapies. By integrating whole-exome sequencing and copy-number analysis of 8 paired tumor-normal DNAs from patients with SMZL, we show that the typical SMZL exome carries ~30 genetic alterations. Targeted resequencing of selected candidates in an extended panel of 40-117 samples revealed activating mutations of NOTCH2, a gene required for marginal-zone (MZ) development, as the most frequent and SMZL-specific lesion, accounting for approximately 20% of cases. Additional altered genes suggest that deregulation of signaling pathways normally involved in MZ development (NOTCH, NF-kappa B, and B-cell receptor) represents a critical event in SMZL pathogenesis. These findings have direct implications for the treatment of SMZL patients since drugs are available which can target NOTCH as well as other pathways deregulated in this disease.

Lien

dbGap study = phs000502

Mots-clés

  1. 31/10/2022 31/10/2022 - Tabea Kampen
  2. 13/12/2022 13/12/2022 - Kristina Keller
Détendeur de droits

Laura Pasqualucci, MD, Institute for Cancer Genetics, Columbia University, New York, NY, USA

Téléchargé le

13 décembre 2022

DOI

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Licence

Creative Commons BY 4.0

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dbGaP phs000502 Genome-Wide Analysis of Splenic Marginal Zone Lymphoma

Subject ID and consent group of participants with splenic marginal zone lymphoma and involved in the "Genome-Wide Analysis of Splenic Marginal Zone Lymphoma" project.

pht002813
Description

pht002813

De-identified subject's ID
Description

SUBJID

Type de données

string

Alias
UMLS CUI [1,1]
C2348585
Consent group as determined by DAC
Description

CONSENT

Type de données

string

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C1711341

Similar models

Subject ID and consent group of participants with splenic marginal zone lymphoma and involved in the "Genome-Wide Analysis of Splenic Marginal Zone Lymphoma" project.

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht002813
SUBJID
Item
De-identified subject's ID
string
C2348585 (UMLS CUI [1,1])
Item
Consent group as determined by DAC
string
C0021430 (UMLS CUI [1,1])
C1711341 (UMLS CUI [1,2])
Code List
Consent group as determined by DAC
CL Item
Cancer Research and General Methods with Publication Statement (CRGM_PUB) (1)

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