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ID

45473

Descrizione

Principal Investigator: Laura Pasqualucci, MD, Institute for Cancer Genetics, Columbia University, New York, NY, USA MeSH: Lymphoma, Non-Hodgkin,Lymphoma, B-Cell https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000502 Splenic Marginal Zone Lymphoma (SMZL) is a B-cell malignancy of unknown pathogenesis and thus orphan of targeted therapies. By integrating whole-exome sequencing and copy-number analysis of 8 paired tumor-normal DNAs from patients with SMZL, we show that the typical SMZL exome carries ~30 genetic alterations. Targeted resequencing of selected candidates in an extended panel of 40-117 samples revealed activating mutations of NOTCH2, a gene required for marginal-zone (MZ) development, as the most frequent and SMZL-specific lesion, accounting for approximately 20% of cases. Additional altered genes suggest that deregulation of signaling pathways normally involved in MZ development (NOTCH, NF-kappa B, and B-cell receptor) represents a critical event in SMZL pathogenesis. These findings have direct implications for the treatment of SMZL patients since drugs are available which can target NOTCH as well as other pathways deregulated in this disease.

collegamento

dbGap study = phs000502

Keywords

  1. 31/10/22 31/10/22 - Tabea Kampen
  2. 13/12/22 13/12/22 - Kristina Keller
Titolare del copyright

Laura Pasqualucci, MD, Institute for Cancer Genetics, Columbia University, New York, NY, USA

Caricato su

13 dicembre 2022

DOI

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Licenza

Creative Commons BY 4.0

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    dbGaP phs000502 Genome-Wide Analysis of Splenic Marginal Zone Lymphoma

    Subject ID and consent group of participants with splenic marginal zone lymphoma and involved in the "Genome-Wide Analysis of Splenic Marginal Zone Lymphoma" project.

    pht002813
    Descrizione

    pht002813

    De-identified subject's ID
    Descrizione

    SUBJID

    Tipo di dati

    string

    Alias
    UMLS CUI [1,1]
    C2348585
    Consent group as determined by DAC
    Descrizione

    CONSENT

    Tipo di dati

    string

    Alias
    UMLS CUI [1,1]
    C0021430
    UMLS CUI [1,2]
    C1711341

    Similar models

    Subject ID and consent group of participants with splenic marginal zone lymphoma and involved in the "Genome-Wide Analysis of Splenic Marginal Zone Lymphoma" project.

    Name
    genere
    Description | Question | Decode (Coded Value)
    Tipo di dati
    Alias
    Item Group
    pht002813
    SUBJID
    Item
    De-identified subject's ID
    string
    C2348585 (UMLS CUI [1,1])
    Item
    Consent group as determined by DAC
    string
    C0021430 (UMLS CUI [1,1])
    C1711341 (UMLS CUI [1,2])
    Code List
    Consent group as determined by DAC
    CL Item
    Cancer Research and General Methods with Publication Statement (CRGM_PUB) (1)

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