ID

45432

Beskrivning

Principal Investigator: Ann G. Schwartz, PhD, MPH, Karmanos Cancer Institute, Wayne State University, Detroit, MI, USA MeSH: Lung Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000629 Familial lung cancer cases were collected by the Genetic Epidemiology of Lung Cancer Consortium (GELCC) recruitment sites: University of Cincinnati, Karmanos Cancer Institute at Wayne State University, Louisiana State University Health Sciences Center-New Orleans, Mayo Clinic, and Medical College of Ohio. Familial cases for this study came from three sources: 1) one case each from families (at least 3 affected lung cancer cases in the family) included in the linkage analysis; 2) one case from linkage-eligible families (at least 3 affected lung cancer cases in the family) but where there were insufficient biospecimens available to make them informative for linkage analysis; and 3) one case from families not eligible for the linkage study with a family history of at least one first or second degree relative affected with lung cancer. Unrelated controls were selected from 1) among the spouses of family members, thus matching on socio-economic status (SES) and ethnicity (typically) of the cases or 2) from case-control studies of lung cancer conducted in the same location in which the linkage families were collected and matched on age, sex, and race. All cases and controls self-reported as European American. Biospecimens used for normal DNA extraction included blood, saliva or mouthwash. Some samples underwent whole genome amplication.

Länk

dbGaP-study=phs000629

Nyckelord

  1. 2022-11-29 2022-11-29 - Chiara Middel
Rättsinnehavare

Ann G. Schwartz, PhD, MPH, Karmanos Cancer Institute, Wayne State University, Detroit, MI, USA

Uppladdad den

29 november 2022

DOI

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Licens

Creative Commons BY 4.0

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dbGaP phs000629 GWAS of Familial Lung Cancer

Subject ID, sample ID, and sample use variable associated with participants affected or not affected with familial lung cancer and involved in the "Genetic Epidemiology of Lung Cancer Consortium GWAS of Familial Lung Cancer" project.

pht003386
Beskrivning

pht003386

Alias
UMLS CUI [1,1]
C3846158
De-identified subject ID
Beskrivning

SUBJECT_ID

Datatyp

text

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
De-identified subject ID
Beskrivning

SAMPLE_ID

Datatyp

text

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Sample Use
Beskrivning

SAMPLE_USE

Datatyp

text

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C1524063
Sample source
Beskrivning

SAMPLE_SOURCE

Datatyp

text

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0449416
Source sample ID
Beskrivning

SOURCE_SAMPLE_ID

Datatyp

text

Alias
UMLS CUI [1,1]
C1299222
UMLS CUI [1,2]
C0449416

Similar models

Subject ID, sample ID, and sample use variable associated with participants affected or not affected with familial lung cancer and involved in the "Genetic Epidemiology of Lung Cancer Consortium GWAS of Familial Lung Cancer" project.

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
pht003386
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
De-identified subject ID
text
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
SAMPLE_ID
Item
De-identified subject ID
text
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Sample Use
text
C2347026 (UMLS CUI [1,1])
C1524063 (UMLS CUI [1,2])
Code List
Sample Use
CL Item
SNP genotypes obtained using standard or custom microarrays (Array_SNP)
C2347026 (UMLS CUI [1,1])
C0042153 (UMLS CUI [1,2])
C0752046 (UMLS CUI [1,3])
C1449575 (UMLS CUI [1,4])
SAMPLE_SOURCE
Item
Sample source
text
C2347026 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
SOURCE_SAMPLE_ID
Item
Source sample ID
text
C1299222 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])

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