ID

45428

Descrição

Principal Investigator: Ravindra Majeti, MD, PhD, Stanford University, Stanford, CA, USA MeSH: Leukemia, Myeloid, Acute https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000549 Acute myeloid leukemia is an aggressive clonal malignancy of the bone marrow that is the direct result of sequential acquisition of mutations in a single lineage of cells. In this study, we investigate a model in which this mutational acquisition occurs serially in long-lived self-renewing hematopoietic stem cells eventually resulting in frank acute myeloid leukemia. Coding mutations in multiple AML patients were identified using exome sequencing followed by sanger sequencing validation. The level of these mutations was then assessed in residual hematopoietic stem cells from each patient using targeted deep sequencing. These population-level estimates of mutant allele burden were then validated in single cell assays targeted to the identified mutations. This allowed for determination of the order of acquisition of the mutations that preceded the development of the leukemia. The results of this study identify pre-leukemic hematopoietic stem cell clones that could contribute to patient relapse and outcome.

Link

dbGaP study = phs000549

Palavras-chave

  1. 28/11/2022 28/11/2022 - Adrian Schulz
Titular dos direitos

Ravindra Majeti, MD, PhD, Stanford University, Stanford, CA, USA

Transferido a

28 de novembro de 2022

DOI

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Licença

Creative Commons BY 4.0

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dbGaP phs000549 Clonal Evolution of Pre-Leukemic HSC Precedes Human AML

Subject ID, age, white blood cell count at time of diagnosis, somatic internal tandem duplication in FLT3, and sex of participants with acute myeloid leukemia and involved in the "Clonal Evolution of Pre-Leukemic Hematopoietic Stem Cells Precedes Human Acute Myeloid Leukemia" project.

pht002992
Descrição

pht002992

Alias
UMLS CUI [1,1]
C3846158
De-identified subject ID
Descrição

SUBJID

Tipo de dados

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Disease onset age
Descrição

age

Tipo de dados

text

Unidades de medida
  • years
Alias
UMLS CUI [1,1]
C0206132
years
Gender of participant
Descrição

sex

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0079399
White blood cell count at time of diagnosis
Descrição

WBC Count

Tipo de dados

text

Unidades de medida
  • cells/ul
Alias
UMLS CUI [1,1]
C0427512
UMLS CUI [1,2]
C5203987
cells/ul
Somatic internal tandem duplication in FLT3 (Entrez GeneID: 2322) [Positive, Negative]
Descrição

Flt3-ITD Status

Tipo de dados

string

Alias
UMLS CUI [1,1]
C4068107

Similar models

Subject ID, age, white blood cell count at time of diagnosis, somatic internal tandem duplication in FLT3, and sex of participants with acute myeloid leukemia and involved in the "Clonal Evolution of Pre-Leukemic Hematopoietic Stem Cells Precedes Human Acute Myeloid Leukemia" project.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de dados
Alias
Item Group
pht002992
C3846158 (UMLS CUI [1,1])
SUBJID
Item
De-identified subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
age
Item
Disease onset age
text
C0206132 (UMLS CUI [1,1])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Gender of participant
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
WBC Count
Item
White blood cell count at time of diagnosis
text
C0427512 (UMLS CUI [1,1])
C5203987 (UMLS CUI [1,2])
Flt3-ITD Status
Item
Somatic internal tandem duplication in FLT3 (Entrez GeneID: 2322) [Positive, Negative]
string
C4068107 (UMLS CUI [1,1])

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