ID

45428

Beschrijving

Principal Investigator: Ravindra Majeti, MD, PhD, Stanford University, Stanford, CA, USA MeSH: Leukemia, Myeloid, Acute https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000549 Acute myeloid leukemia is an aggressive clonal malignancy of the bone marrow that is the direct result of sequential acquisition of mutations in a single lineage of cells. In this study, we investigate a model in which this mutational acquisition occurs serially in long-lived self-renewing hematopoietic stem cells eventually resulting in frank acute myeloid leukemia. Coding mutations in multiple AML patients were identified using exome sequencing followed by sanger sequencing validation. The level of these mutations was then assessed in residual hematopoietic stem cells from each patient using targeted deep sequencing. These population-level estimates of mutant allele burden were then validated in single cell assays targeted to the identified mutations. This allowed for determination of the order of acquisition of the mutations that preceded the development of the leukemia. The results of this study identify pre-leukemic hematopoietic stem cell clones that could contribute to patient relapse and outcome.

Link

dbGaP study = phs000549

Trefwoorden

  1. 28-11-22 28-11-22 - Adrian Schulz
Houder van rechten

Ravindra Majeti, MD, PhD, Stanford University, Stanford, CA, USA

Geüploaded op

28 november 2022

DOI

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Licentie

Creative Commons BY 4.0

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dbGaP phs000549 Clonal Evolution of Pre-Leukemic HSC Precedes Human AML

Subject ID, age, white blood cell count at time of diagnosis, somatic internal tandem duplication in FLT3, and sex of participants with acute myeloid leukemia and involved in the "Clonal Evolution of Pre-Leukemic Hematopoietic Stem Cells Precedes Human Acute Myeloid Leukemia" project.

pht002992
Beschrijving

pht002992

Alias
UMLS CUI [1,1]
C3846158
De-identified subject ID
Beschrijving

SUBJID

Datatype

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Disease onset age
Beschrijving

age

Datatype

text

Maateenheden
  • years
Alias
UMLS CUI [1,1]
C0206132
years
Gender of participant
Beschrijving

sex

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
White blood cell count at time of diagnosis
Beschrijving

WBC Count

Datatype

text

Maateenheden
  • cells/ul
Alias
UMLS CUI [1,1]
C0427512
UMLS CUI [1,2]
C5203987
cells/ul
Somatic internal tandem duplication in FLT3 (Entrez GeneID: 2322) [Positive, Negative]
Beschrijving

Flt3-ITD Status

Datatype

string

Alias
UMLS CUI [1,1]
C4068107

Similar models

Subject ID, age, white blood cell count at time of diagnosis, somatic internal tandem duplication in FLT3, and sex of participants with acute myeloid leukemia and involved in the "Clonal Evolution of Pre-Leukemic Hematopoietic Stem Cells Precedes Human Acute Myeloid Leukemia" project.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht002992
C3846158 (UMLS CUI [1,1])
SUBJID
Item
De-identified subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
age
Item
Disease onset age
text
C0206132 (UMLS CUI [1,1])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Gender of participant
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
WBC Count
Item
White blood cell count at time of diagnosis
text
C0427512 (UMLS CUI [1,1])
C5203987 (UMLS CUI [1,2])
Flt3-ITD Status
Item
Somatic internal tandem duplication in FLT3 (Entrez GeneID: 2322) [Positive, Negative]
string
C4068107 (UMLS CUI [1,1])

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