ID

45410

Description

Principal Investigator: Ashley Hill, MD, Children's National Medical Center, Washington, DC, USA MeSH: Pleuropulmonary blastoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000543 Pleuropulmonary blastoma (PPB) is a rare, aggressive pediatric cancer arising from the lung or pleural cavity. In this study, we sequenced and analyzed the exomes of 15 PPB matched tumor and normal pairs. This study is part of a larger effort to characterize pediatric cancers as part of the Slim Initiative for Genomic Medicine (SIGMA) project.

Link

dbGap-study=phs000543

Keywords

  1. 11/19/22 11/19/22 - Chiara Middel
Copyright Holder

Ashley Hill, MD, Children's National Medical Center, Washington, DC, USA

Uploaded on

November 19, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000543 Exome Sequencing of Pleuropulmonary Blastoma

Sample ID, analyte type, tumor type [primary or recurrent], sample type [tumor or normal] and body site where samples were obtained from participants with pleuropulmonary blastoma and involved in the "Genomic Sequencing of Pleuropulmonary blastoma" project.

pht002939
Description

pht002939

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Description

SAMPID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Indicates the Tumor / Normal status of a sample
Description

SAMPLE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C0475752
Molecular analyte [DNA]
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C0443354
UMLS CUI [1,2]
C1513380
General body site where sample was collected [Brain, Lung]
Description

TISSUE SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
Indicates primary or recurrent tumor [Primary, Recurrent]
Description

TUMOR TYPE

Data type

string

Alias
UMLS CUI [1,1]
C0677930
UMLS CUI [2,1]
C0277556

Similar models

Sample ID, analyte type, tumor type [primary or recurrent], sample type [tumor or normal] and body site where samples were obtained from participants with pleuropulmonary blastoma and involved in the "Genomic Sequencing of Pleuropulmonary blastoma" project.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht002939
C3846158 (UMLS CUI [1,1])
SAMPID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
SAMPLE_TYPE
Item
Indicates the Tumor / Normal status of a sample
string
C0475752 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Molecular analyte [DNA]
string
C0443354 (UMLS CUI [1,1])
C1513380 (UMLS CUI [1,2])
TISSUE SITE
Item
General body site where sample was collected [Brain, Lung]
string
C0449705 (UMLS CUI [1,1])
TUMOR TYPE
Item
Indicates primary or recurrent tumor [Primary, Recurrent]
string
C0677930 (UMLS CUI [1,1])
C0277556 (UMLS CUI [2,1])

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