ID

45398

Description

Principal Investigator: Nancy F. Butte, PhD, Baylor College of Medicine, Houston, TX, USA MeSH: Obesity,Diabetes Mellitus, Type 2 https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000616 The VIVA LA FAMILIA Study was designed to identify genetic variants influencing childhood obesity and its comorbidities in the Hispanic population. Family recruitment and phenotyping were conducted in 2000-2005 in Houston, TX. All enrolled children (n=1030) and parents gave written informed consent or assent. The protocol was approved by the Institutional Review Boards for Human Subject Research for Baylor College of Medicine and Affiliated Hospitals and for Texas Biomedical Research Institute. The VIVA LA FAMILIA study design and methodology have been described in detail (Butte NF, 2006). Each family was ascertained on an obese proband, defined as a BMI 95th percentile, between the ages 4-19 y. The cross-sectional, longitudinal study design consisted of baseline measurements, with a one-year. GWAS was performed using the Illumina HumanOmni1 v1.0 BeadChips on 815 children from 263 Hispanic families and HumanOmni 2.5-8v1 on an additional 43 children. Exome sequencing is being performed on 822 children using NimbleGen capture, followed by Illumina DNA sequencing. Butte NF, Cai G, Cole SA, Comuzzie AG. Viva la Familia Study: genetic and environmental contributions to childhood obesity and its comorbidities in Hispanic population. Am J Clin Nutr 2006;84(3):646-54. PMID: 16960181

Link

dbGaP study = phs000616

Keywords

  1. 11/15/22 11/15/22 - Simon Heim
Copyright Holder

Nancy F. Butte, PhD, Baylor College of Medicine, Houston, TX, USA

Uploaded on

November 15, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000616 CIP: Obesity-Diabetes Familial Risk

This subject consent file includes subject IDs, consent group information, and affection status for childhood obesity.

pht003368
Description

pht003368

Alias
UMLS CUI [1,1]
C3846158
De-identified Subject_Ego
Description

Deidentified_Ego

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Consent group as determined by DAC
Description

CONSENT

Data type

text

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C1257890
Case control status of the subject. Obese is defined as overweight proband between the ages 4-19 y, using a bivariate ascertainment scheme (i.e., obese >= 95th percentile for BMI (2000 CDC Growth Reference) and >= 85th percentile for FM (CNRC body composition reference database).
Description

AFFECTION_STATUS

Data type

text

Alias
UMLS CUI [1,1]
C3274646
UMLS CUI [1,2]
C0205653
UMLS CUI [1,3]
C0001779
UMLS CUI [1,4]
C0028754
UMLS CUI [1,5]
C1305855
UMLS CUI [1,6]
C0681927

Similar models

This subject consent file includes subject IDs, consent group information, and affection status for childhood obesity.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht003368
C3846158 (UMLS CUI [1,1])
Deidentified_Ego
Item
De-identified Subject_Ego
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Consent group as determined by DAC
text
C0021430 (UMLS CUI [1,1])
C1257890 (UMLS CUI [1,2])
Code List
Consent group as determined by DAC
CL Item
Subjects did not participate in the study, did not complete a consent document and are included only for the pedigree structure and/or genotype controls, such as HapMap subjects (0)
CL Item
Disease-Specific (Obesity, IRB, RD) (DS-OBS-IRB-RD) (1)
Item
Case control status of the subject. Obese is defined as overweight proband between the ages 4-19 y, using a bivariate ascertainment scheme (i.e., obese >= 95th percentile for BMI (2000 CDC Growth Reference) and >= 85th percentile for FM (CNRC body composition reference database).
text
C3274646 (UMLS CUI [1,1])
C0205653 (UMLS CUI [1,2])
C0001779 (UMLS CUI [1,3])
C0028754 (UMLS CUI [1,4])
C1305855 (UMLS CUI [1,5])
C0681927 (UMLS CUI [1,6])
Code List
Case control status of the subject. Obese is defined as overweight proband between the ages 4-19 y, using a bivariate ascertainment scheme (i.e., obese >= 95th percentile for BMI (2000 CDC Growth Reference) and >= 85th percentile for FM (CNRC body composition reference database).
CL Item
nonobese (0)
CL Item
obese (1)

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