ID

45380

Beskrivning

Principal Investigator: Arul M. Chinnaiyan, MD, PhD, Michigan Center for Translational Pathology, University of Michigan Ann Arbor, Michigan, USA MeSH: Breast Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000513 Paired-end transcriptome sequencing was performed on a panel of breast cancer cell lines and tissues and a set of benign cell line and tissue controls. Analyses of the paired end sequences were performed and chimeric transcripts derived from gene rearrangement events were identified. Sequencing was performed on Illumina GAII and HiSeq 2000 platforms with read lengths from 40 to 100 bases.

Länk

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000513

Nyckelord

  1. 2022-11-07 2022-11-07 - Simon Heim
  2. 2022-12-13 2022-12-13 - Kristina Keller
Rättsinnehavare

Arul M. Chinnaiyan, MD, PhD, Michigan Center for Translational Pathology, University of Michigan Ann Arbor, Michigan, USA

Uppladdad den

7 november 2022

DOI

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Licens

Creative Commons BY 4.0

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dbGaP phs000513 MAST Kinase and Notch Gene Families in Breast Cancer

Subject ID, subject source, subject source ID, consent group, and affection status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.

pht002824
Beskrivning

pht002824

Alias
UMLS CUI [1,1]
C3846158
Subject ID
Beskrivning

SUBJID

Datatyp

string

Alias
UMLS CUI [1,1]
C2348585
Consent group as determined by DAC
Beskrivning

CONSENT

Datatyp

text

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C1257890
Source repository where subjects originate
Beskrivning

SUBJ_SOURCE

Datatyp

string

Alias
UMLS CUI [1,1]
C3847505
UMLS CUI [1,2]
C0449416
UMLS CUI [1,3]
C0681850
Subject ID used in the Source Repository
Beskrivning

SOURCE_SUBJID

Datatyp

string

Alias
UMLS CUI [1,1]
C2348585
UMLS CUI [1,2]
C3847505
UMLS CUI [1,3]
C0449416
Case control status of the subject
Beskrivning

AFFECTION_STATUS

Datatyp

text

Alias
UMLS CUI [1,1]
C3274646

Similar models

Subject ID, subject source, subject source ID, consent group, and affection status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
pht002824
C3846158 (UMLS CUI [1,1])
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
Item
Consent group as determined by DAC
text
C0021430 (UMLS CUI [1,1])
C1257890 (UMLS CUI [1,2])
Code List
Consent group as determined by DAC
CL Item
Cancer Research and General Methods (CRGM) (1)
SUBJ_SOURCE
Item
Source repository where subjects originate
string
C3847505 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
C0681850 (UMLS CUI [1,3])
SOURCE_SUBJID
Item
Subject ID used in the Source Repository
string
C2348585 (UMLS CUI [1,1])
C3847505 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
Item
Case control status of the subject
text
C3274646 (UMLS CUI [1,1])
Code List
Case control status of the subject
CL Item
Control (1)
C3274648 (UMLS CUI [1,1])
CL Item
Case (2)
C3274647 (UMLS CUI [1,1])
CL Item
Other (3)

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