ID
45380
Description
Principal Investigator: Arul M. Chinnaiyan, MD, PhD, Michigan Center for Translational Pathology, University of Michigan Ann Arbor, Michigan, USA MeSH: Breast Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000513 Paired-end transcriptome sequencing was performed on a panel of breast cancer cell lines and tissues and a set of benign cell line and tissue controls. Analyses of the paired end sequences were performed and chimeric transcripts derived from gene rearrangement events were identified. Sequencing was performed on Illumina GAII and HiSeq 2000 platforms with read lengths from 40 to 100 bases.
Link
https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000513
Keywords
Versions (2)
- 11/7/22 11/7/22 - Simon Heim
- 12/13/22 12/13/22 - Kristina Keller
Copyright Holder
Arul M. Chinnaiyan, MD, PhD, Michigan Center for Translational Pathology, University of Michigan Ann Arbor, Michigan, USA
Uploaded on
November 7, 2022
DOI
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License
Creative Commons BY 4.0
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dbGaP phs000513 MAST Kinase and Notch Gene Families in Breast Cancer
Subject ID, subject source, subject source ID, consent group, and affection status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- StudyEvent: SEV1
- Subject ID, subject source, subject source ID, consent group, and affection status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- Sample ID, subject ID, sample source, sample source ID, and sample use variables obtained from participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- Subject ID, ER, ERBB2, and PR expression status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- Sample ID, analyte type, tumor status, body site where samples were collected, and obtained from participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
Similar models
Subject ID, subject source, subject source ID, consent group, and affection status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- StudyEvent: SEV1
- Subject ID, subject source, subject source ID, consent group, and affection status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- Sample ID, subject ID, sample source, sample source ID, and sample use variables obtained from participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- Subject ID, ER, ERBB2, and PR expression status of participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
- Sample ID, analyte type, tumor status, body site where samples were collected, and obtained from participants with breast cancer and involved in the "Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer" project.
C1257890 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,2])
C0681850 (UMLS CUI [1,3])
C3847505 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])