ID

45303

Description

Principal Investigator: Harald Jüppner, MD, Massachusetts General Hospital, Boston, MA, USA MeSH: Vesico-Ureteral Reflux,Hypophosphatemia, Familial,Hajdu-Cheney Syndrome https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000477 - Several different genes cause, when mutated, increased urinary phosphate excretion and hypophosphatemia leading to rickets/osteomalacia; however, the majority of phosphate-wasting disorders has not yet been defined at the molecular level. Identification of phosphate-regulating genes has provided important novel insights into the mechanism contributing to phosphate homeostasis, which remains incompletely understood. We therefore pursue exome-wide nucleotide sequence analysis to define the underlying mutations, which is expected to provide novel insights into the regulation of this important mineral. - Virtually nothing is known about the genetic mutations that cause non-syndromic structural abnormalities involving the urinary tract, which represent about 50% of the causes of end-stage renal disease (ESRD). The completion of the human genome project and the technological advances that allow low cost whole exome sequencing have now made it feasible to readily search for the cause of different inherited disorders in humans, particularly if clinical information and genomic DNA is available from larger kindreds with multiple affected members that can be used for mapping the disease-causing genetic locus. Furthermore, catalogs were generated that document the expression profiles of numerous genes during embryonic, fetal, and postnatal development, thereby supporting the exploration of kidney involvement in animal models of different diseases and in human genetic syndromes. We therefore plan to define the mechanisms leading to inherited disorders of the urogenital tract and the kidneys by establishing the causative genetic defects through a combination of genetic mapping and whole exome sequencing. - Hajdu-Cheney Syndrome (HCS) is a rare autosomal-dominant skeletal disorder characterized by severe osteoporosis, acroosteolysis of the distal phalanges, renal cysts and other abnormalities. Our goal is to identify the genetic cause of HCS using exome sequencing. - Opsismodysplasia is a very rare recessive spondylometaphyseal dysplasia characterized by delayed epiphyseal ossification, shortness of bones and sometimes low serum phosphate levels. Discovery of the causing mutation will give us insights into the pathogenesis of this often lethal disease.

Link

dbGaP study = phs000477

Keywords

  1. 10/19/22 10/19/22 - Adrian Schulz
Copyright Holder

Harald Jüppner, MD, Massachusetts General Hospital, Boston, MA, USA

Uploaded on

October 19, 2022

DOI

To request one please log in.

License

Creative Commons BY 4.0

Model comments :

You can comment on the data model here. Via the speech bubbles at the itemgroups and items you can add comments to those specificially.

Itemgroup comments for :

Item comments for :

In order to download data models you must be logged in. Please log in or register for free.

dbGaP phs000477 Genetic Defects in Familial Renal Disorders

Subject - Consent - Affection Status (All Cases) Information

pht002685
Description

pht002685

Alias
UMLS CUI [1,1]
C3846158
Subject ID
Description

SUBJID

Data type

string

Alias
UMLS CUI [1,1]
C2348585
Case control status of the subject
Description

AFFECTION_STATUS

Data type

text

Alias
UMLS CUI [1,1]
C3274646
Consent status
Description

CONSENT

Data type

text

Alias
UMLS CUI [1,1]
C0021430

Similar models

Subject - Consent - Affection Status (All Cases) Information

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht002685
C3846158 (UMLS CUI [1,1])
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
Item
Case control status of the subject
text
C3274646 (UMLS CUI [1,1])
Code List
Case control status of the subject
CL Item
Control (1)
C3274648 (UMLS CUI [1,1])
CL Item
Case (2)
C3274647 (UMLS CUI [1,1])
Item
Consent status
text
C0021430 (UMLS CUI [1,1])
Code List
Consent status
CL Item
Restricted to familial renal disorders and related conditions; no commercial use. (1)
C0021430 (UMLS CUI [1,1])
C0443288 (UMLS CUI [1,2])
C0241888 (UMLS CUI [1,3])
C0022658 (UMLS CUI [1,4])
C1292726 (UMLS CUI [1,5])
C3841601 (UMLS CUI [1,6])

Please use this form for feedback, questions and suggestions for improvements.

Fields marked with * are required.

Do you need help on how to use the search function? Please watch the corresponding tutorial video for more details and learn how to use the search function most efficiently.

Watch Tutorial