ID

45194

Description

Principal Investigator: Steven R. Brant, MD, Johns Hopkins University, Baltimore, MD, USA MeSH: Crohn Disease,Colitis, Ulcerative,Inflammatory Bowel Diseases https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000367 The National Institute of Diabetes and Digestive and Kidney Diseases Inflammatory Bowel Disease Genetics Consortium (NIDDK - IBDGC) conducted a genome wide association study (GWAS) using the Human Omni2.5-Quad beadchip from Illumina to identify disease variants associated with familial Crohn's disease. This study includes a subset of individuals from an original cohort of affected subjects and affected/unaffected relatives from a previous linkage scan which showed increased linkage evidence at three novel risk loci. A total of 708 samples were selected based on various criteria for inclusion from the 6 Genetic Research Centers (GRC) in North America that participate in the IBDGC. This project was supported by an ancillary R01 grant from the NIDDK with resources made available through the IBDGC.

Link

dbGaP study = phs000367

Keywords

  1. 8/19/22 8/19/22 - Simon Heim
  2. 10/12/22 10/12/22 - Adrian Schulz
Copyright Holder

Steven R. Brant, MD, Johns Hopkins University, Baltimore, MD, USA

Uploaded on

October 12, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000367 Genome Wide Association Study in Familial Crohn's Disease

Subject ID, sample ID, sample source, sample source ID, and sample use of participants with or without Crohn's disease and involved in the "NIDDK Inflammatory Bowel Disease Genetics Consortium (IBDGC) Genome Wide Association Study in Familial Crohn's Disease" project.

pht003262
Description

pht003262

Subject ID
Description

SUBJID

Data type

string

Alias
UMLS CUI [1,1]
C2348585
Sample ID
Description

LOCALID

Data type

string

Alias
UMLS CUI [1,1]
C1299222
Sample Use
Description

SAMPLE_USE

Data type

string

Alias
UMLS CUI [1,1]
C1524063
UMLS CUI [1,2]
C0370003
Sample source
Description

SAMP_SOURCE

Data type

text

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C0370003
Sample source ID
Description

SOURCE_SAMPID

Data type

text

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C1299222

Similar models

Subject ID, sample ID, sample source, sample source ID, and sample use of participants with or without Crohn's disease and involved in the "NIDDK Inflammatory Bowel Disease Genetics Consortium (IBDGC) Genome Wide Association Study in Familial Crohn's Disease" project.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht003262
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
LOCALID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
SAMPLE_USE
Item
Sample Use
string
C1524063 (UMLS CUI [1,1])
C0370003 (UMLS CUI [1,2])
SAMP_SOURCE
Item
Sample source
text
C0449416 (UMLS CUI [1,1])
C0370003 (UMLS CUI [1,2])
SOURCE_SAMPID
Item
Sample source ID
text
C0449416 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])

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