ID

45189

Beskrivning

Principal Investigator: Philip R. Taylor, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA MeSH: Squamous Cell Carcinoma,Esophageal Cancer,Gastric Cancer https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000361 This project aims to conduct genome-wide association studies (GWAS) in two anatomically different upper gastrointestinal (UGI) cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCCs) and gastric cancers (GCs) and is comprised of Asians (*the "Asian UGI GWAS"*), while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia (*the "Non-Asian UGI GWAS"*). Study participants for the Asian UGI GWAS reported here (Illumina 660W Quad chip) were drawn from 2 studies, the Shanxi Upper Gastrointestinal Cancer Genetics Project (Shanxi) and the Linxian Nutrition Intervention Trial (NIT), a prospective cohort, and included a total of 1898 ESCCs, 1625 GCs, and 2100 controls. For the 2nd phase (8 TaqMan SNPs), additional subjects from Shanxi and NIT as well as subjects from the Shanghai Men's Health Study (SMHS), the Shanghai Women's Health Study (SWHS), and the Singapore Chinese Health Study (SCHS) were also included (217 ESCCs, 615 GCs, 1202 controls). Altogether 2115 ESCCs, 2240 GCs, and 3302 controls were genotyped in this study.

Länk

dbGaP study = phs000361

Nyckelord

  1. 2022-08-19 2022-08-19 - Simon Heim
  2. 2022-10-12 2022-10-12 - Adrian Schulz
Rättsinnehavare

Philip R. Taylor, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA

Uppladdad den

12 oktober 2022

DOI

För en begäran logga in.

Licens

Creative Commons BY 4.0

Modellkommentarer :

Här kan du kommentera modellen. Med hjälp av pratbubblor i Item-grupperna och Item kan du lägga in specifika kommentarer.

Itemgroup-kommentar för :

Item-kommentar för :

Du måste vara inloggad för att kunna ladda ner formulär. Var vänlig logga in eller registrera dig utan kostnad.

dbGaP phs000361 Genome-Wide Association Studies in Upper Gastrointestinal Cancers (Asian)

Subject ID, consent group, and affection status of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.

  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. Subject ID, consent group, and affection status of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.
    3. Sample ID and subject ID of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.
    4. Subject ID, study design (cohort, case or control), affection status, gender, and age of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.
pht002221
Beskrivning

pht002221

De-identified subject's ID
Beskrivning

SUBJID

Datatyp

string

Alias
UMLS CUI [1,1]
C2346787
UMLS CUI [1,2]
C2348585
Consent group as determined by DAC
Beskrivning

CONSENT

Datatyp

string

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C1257890
Case or control? [ESCC CASE=Esophageal squamous cell carcinomas, GC CASE=Gastric cancers, CONTROL=Control]
Beskrivning

AFFECTION_STATUS

Datatyp

string

Alias
UMLS CUI [1,1]
C3274646

Similar models

Subject ID, consent group, and affection status of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.

  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. Subject ID, consent group, and affection status of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.
    3. Sample ID and subject ID of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.
    4. Subject ID, study design (cohort, case or control), affection status, gender, and age of participants involved in genome-wide association studies in two anatomically different upper gastrointestinal cancer sites in two populations with distinctly different disease rates and genetic profiles. One population has very high rates for both esophageal squamous cell carcinomas (ESCC) and gastric cancers (GC) and is comprised of Asians, while the other population has low rates of ESCC and GC and includes non-Asians from the Americas, Europe, and Australia.
Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
pht002221
SUBJID
Item
De-identified subject's ID
string
C2346787 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
CONSENT
Item
Consent group as determined by DAC
string
C0021430 (UMLS CUI [1,1])
C1257890 (UMLS CUI [1,2])
AFFECTION_STATUS
Item
Case or control? [ESCC CASE=Esophageal squamous cell carcinomas, GC CASE=Gastric cancers, CONTROL=Control]
string
C3274646 (UMLS CUI [1,1])

Använd detta formulär för feedback, frågor och förslag på förbättringar.

Fält markerade med * är obligatoriska.

Do you need help on how to use the search function? Please watch the corresponding tutorial video for more details and learn how to use the search function most efficiently.

Watch Tutorial