ID

45174

Beskrivning

Principal Investigator: Dan Roden, MD, Vanderbilt University Medical Center, Nashville, TN, USA MeSH: Long QT Syndrome,Torsades de Pointes https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000331 The goal of this study was to identify genetic risk factors for drug-induced prolongation of the QT interval (diLQT) and the ventricular arrhythmia torsades de pointes (TdP). We conducted a genome-wide association study (GWAS) focusing on subjects with a history of long QT and/or TdP after taking medication. Controls for this study were individuals with a history of cardiac arrhythmias who had begun treatment with potentially QT-prolonging antiarrhythmics. An additional control group of normal volunteers were given ibutilide, a drug with documented proarrhythmic properties. All study participants were recruited and treated/evaluated at Vanderbilt University Medical Center. This study was conducted by the Pharmacogenomics of Arrhythmia Therapy subgroup of the Pharmacogenetics Research Network, a nationwide collaboration of scientists studying the genetic contributions to drug response variability. Genotyping was performed by the RIKEN research institute in Japan using the Illumina 610 Quad Beadchip platform.

Länk

dbGaP study = phs000331

Nyckelord

Versioner (2)
  1. 22/08/2022 22/08/2022 - Simon Heim
  2. 12/10/2022 12/10/2022 - Adrian Schulz
Rättsinnehavare

Dan Roden, MD, Vanderbilt University Medical Center, Nashville, TN, USA

Uppladdad den

12 de outubro de 2022

DOI

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Licens

Creative Commons BY 4.0
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dbGaP phs000331 PGRN-RIKEN: Genome-Wide Association Study of Drug-Induced Long-QT Syndrome

Engelsk

Eligibility Criteria

4 Formulär  
Inclusion and exclusion criteria
Beskrivning

Inclusion and exclusion criteria

*Inclusion criteria for Cases:* Cases were defined as those subjects ≥18 years of age at the time of an incident of drug-induced LQTS and/or TdP who had one of the following:
Beskrivning

*Inclusion criteria for Cases:* Cases were defined as those subjects ≥18 years of age at the time of an incident of drug-induced LQTS and/or TdP who had one of the following:

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0001779
UMLS CUI [1,4]
C0023976
UMLS CUI [1,5]
C0040479
An uncorrected QT interval ≥600 msec while on drug that decreased to <480 msec following withdrawal of drug;
Beskrivning

An uncorrected QT interval ≥600 msec while on drug that decreased to <480 msec following withdrawal of drug;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0577807
UMLS CUI [1,4]
C0743284
A change in uncorrected QT interval of at least 100 msec (either from the pre-exposure to the during-exposure ECG or from the during-exposure to the post-exposure ECG) with an uncorrected QT interval >480 msec while on drug; or
Beskrivning

A change in uncorrected QT interval of at least 100 msec (either from the pre-exposure to the during-exposure ECG or from the during-exposure to the post-exposure ECG) with an uncorrected QT interval >480 msec while on drug; or

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0577807
UMLS CUI [1,4]
C0743284
An episode of ECG-documented TdP with a subsequent ECG with no evidence of TdP following withdrawal of drug.
Beskrivning

An episode of ECG-documented TdP with a subsequent ECG with no evidence of TdP following withdrawal of drug.

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0743284
UMLS CUI [1,4]
C1623258
UMLS CUI [1,5]
C0040479
UMLS CUI [2,1]
C1512693
UMLS CUI [2,2]
C1706256
UMLS CUI [2,3]
C1395815
UMLS CUI [2,4]
C1623258
UMLS CUI [2,5]
C1298908
UMLS CUI [2,6]
C0040479
*Exclusion criteria for Cases:*
Beskrivning

*Exclusion criteria for Cases:*

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
Potassium level ≤3 mmol at onset of event (1 mEq = 1 mmol);
Beskrivning

Potassium level ≤3 mmol at onset of event (1 mEq = 1 mmol);

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0302353
Subarachnoid hemorrhage at onset of event;
Beskrivning

Subarachnoid hemorrhage at onset of event;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0038525
UMLS CUI [1,4]
C0574845
Cardiac bypass <24 hours before onset of event;
Beskrivning

Cardiac bypass <24 hours before onset of event;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0010055
UMLS CUI [1,4]
C0332152
UMLS CUI [1,5]
C0574845
Hospital admission diagnosis of hypothermia at time of event;
Beskrivning

Hospital admission diagnosis of hypothermia at time of event;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0184666
UMLS CUI [1,4]
C0020672
UMLS CUI [1,5]
C4759356
Diagnosed with congenital LQTS prior to onset of event;
Beskrivning

Diagnosed with congenital LQTS prior to onset of event;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C1141890
UMLS CUI [1,4]
C0332152
UMLS CUI [1,5]
C0332162
UMLS CUI [1,6]
C0441471
Currently leukopenic (WBC<1000 cells/mL);
Beskrivning

Currently leukopenic (WBC<1000 cells/mL);

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0023530
Has had a non-autologous bone marrow transplant at anytime in the past
Beskrivning

Has had a non-autologous bone marrow transplant at anytime in the past

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C4039784
*Inclusion criteria for Control Group A:*
Beskrivning

*Inclusion criteria for Control Group A:*

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
18 years of age or older;
Beskrivning

18 years of age or older;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0001779
New start on QT-prolonging antiarrhythmic drug(s); and
Beskrivning

New start on QT-prolonging antiarrhythmic drug(s); and

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0151878
UMLS CUI [1,4]
C0003195
Hasn't received a blood transfusion in the past 4 months
Beskrivning

Hasn't received a blood transfusion in the past 4 months

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C1298908
UMLS CUI [1,4]
C0005841
*Inclusion criteria for Control Group B:*
Beskrivning

*Inclusion criteria for Control Group B:*

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
Healthy subjects between the ages of 18 and 40;
Beskrivning

Healthy subjects between the ages of 18 and 40;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0001779
Not on any regular medication;
Beskrivning

Not on any regular medication;

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C1298908
UMLS CUI [1,4]
C0455633
Non-smoker; and
Beskrivning

Non-smoker; and

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0337672
Normal ECG
Beskrivning

Normal ECG

Datatyp

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0522054
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Similar models

Eligibility Criteria

4 Formulär
Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
Inclusion and exclusion criteria
*Inclusion criteria for Cases:* Cases were defined as those subjects ≥18 years of age at the time of an incident of drug-induced LQTS and/or TdP who had one of the following:
Item
*Inclusion criteria for Cases:* Cases were defined as those subjects ≥18 years of age at the time of an incident of drug-induced LQTS and/or TdP who had one of the following:
boolean
C1512693 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0001779 (UMLS CUI [1,3])
C0023976 (UMLS CUI [1,4])
C0040479 (UMLS CUI [1,5])
An uncorrected QT interval ≥600 msec while on drug that decreased to <480 msec following withdrawal of drug;
Item
An uncorrected QT interval ≥600 msec while on drug that decreased to <480 msec following withdrawal of drug;
boolean
C1512693 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0577807 (UMLS CUI [1,3])
C0743284 (UMLS CUI [1,4])
A change in uncorrected QT interval of at least 100 msec (either from the pre-exposure to the during-exposure ECG or from the during-exposure to the post-exposure ECG) with an uncorrected QT interval >480 msec while on drug; or
Item
A change in uncorrected QT interval of at least 100 msec (either from the pre-exposure to the during-exposure ECG or from the during-exposure to the post-exposure ECG) with an uncorrected QT interval >480 msec while on drug; or
boolean
C1512693 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0577807 (UMLS CUI [1,3])
C0743284 (UMLS CUI [1,4])
An episode of ECG-documented TdP with a subsequent ECG with no evidence of TdP following withdrawal of drug.
Item
An episode of ECG-documented TdP with a subsequent ECG with no evidence of TdP following withdrawal of drug.
boolean
C1512693 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0743284 (UMLS CUI [1,3])
C1623258 (UMLS CUI [1,4])
C0040479 (UMLS CUI [1,5])
C1512693 (UMLS CUI [2,1])
C1706256 (UMLS CUI [2,2])
C1395815 (UMLS CUI [2,3])
C1623258 (UMLS CUI [2,4])
C1298908 (UMLS CUI [2,5])
C0040479 (UMLS CUI [2,6])
*Exclusion criteria for Cases:*
Item
*Exclusion criteria for Cases:*
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
Potassium level ≤3 mmol at onset of event (1 mEq = 1 mmol);
Item
Potassium level ≤3 mmol at onset of event (1 mEq = 1 mmol);
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0302353 (UMLS CUI [1,3])
Subarachnoid hemorrhage at onset of event;
Item
Subarachnoid hemorrhage at onset of event;
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0038525 (UMLS CUI [1,3])
C0574845 (UMLS CUI [1,4])
Cardiac bypass <24 hours before onset of event;
Item
Cardiac bypass <24 hours before onset of event;
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0010055 (UMLS CUI [1,3])
C0332152 (UMLS CUI [1,4])
C0574845 (UMLS CUI [1,5])
Hospital admission diagnosis of hypothermia at time of event;
Item
Hospital admission diagnosis of hypothermia at time of event;
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0184666 (UMLS CUI [1,3])
C0020672 (UMLS CUI [1,4])
C4759356 (UMLS CUI [1,5])
Diagnosed with congenital LQTS prior to onset of event;
Item
Diagnosed with congenital LQTS prior to onset of event;
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C1141890 (UMLS CUI [1,3])
C0332152 (UMLS CUI [1,4])
C0332162 (UMLS CUI [1,5])
C0441471 (UMLS CUI [1,6])
Currently leukopenic (WBC<1000 cells/mL);
Item
Currently leukopenic (WBC<1000 cells/mL);
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0023530 (UMLS CUI [1,3])
Has had a non-autologous bone marrow transplant at anytime in the past
Item
Has had a non-autologous bone marrow transplant at anytime in the past
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C4039784 (UMLS CUI [1,3])
*Inclusion criteria for Control Group A:*
Item
*Inclusion criteria for Control Group A:*
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
18 years of age or older;
Item
18 years of age or older;
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0001779 (UMLS CUI [1,3])
New start on QT-prolonging antiarrhythmic drug(s); and
Item
New start on QT-prolonging antiarrhythmic drug(s); and
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0151878 (UMLS CUI [1,3])
C0003195 (UMLS CUI [1,4])
Hasn't received a blood transfusion in the past 4 months
Item
Hasn't received a blood transfusion in the past 4 months
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C1298908 (UMLS CUI [1,3])
C0005841 (UMLS CUI [1,4])
*Inclusion criteria for Control Group B:*
Item
*Inclusion criteria for Control Group B:*
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
Healthy subjects between the ages of 18 and 40;
Item
Healthy subjects between the ages of 18 and 40;
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0001779 (UMLS CUI [1,3])
Not on any regular medication;
Item
Not on any regular medication;
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C1298908 (UMLS CUI [1,3])
C0455633 (UMLS CUI [1,4])
Non-smoker; and
Item
Non-smoker; and
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0337672 (UMLS CUI [1,3])
Normal ECG
Item
Normal ECG
boolean
C1512693 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0522054 (UMLS CUI [1,3])
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