ID

45156

Description

Principal Investigator: Tatiana Foroud, PhD, Indiana University School of Medicine, Indianapolis, IN, USA MeSH: Parkinson Disease https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000376 We have an ongoing study that has recruited families having at least a sibling pair with Parkinson disease (PD). Families have been screened for mutations in known PD causative genes (LRRK2, parkin, etc). Following review of families without a causative mutation, we selected families for whole exome sequencing that had the strongest history of PD and with the most definitive diagnosis. All families have at least 3 affected family members who were evaluated as part of this study. Only affected family members were included for whole exome sequencing.

Link

dbGaP study = phs000376

Keywords

  1. 9/4/22 9/4/22 - Simon Heim
  2. 10/12/22 10/12/22 - Adrian Schulz
Copyright Holder

Tatiana Foroud, PhD, Indiana University School of Medicine, Indianapolis, IN, USA

Uploaded on

October 12, 2022

DOI

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License

Creative Commons BY 4.0

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    dbGaP phs000376 Whole Exome Sequencing in Familial Parkinson Disease

    Eligibility Criteria

    Inclusion and exclusion criteria
    Description

    Inclusion and exclusion criteria

    Family members were evaluated, whenever possible, in person using a series of standard case report forms. The UK Brain Bank criteria were implemented as a Diagnostic Checklist (Pankratz et al., 2002) and all individuals included for sequencing met the modified UK Brain Bank criteria. The modified criteria allows for a family history of PD.
    Description

    Family members were evaluated, whenever possible, in person using a series of standard case report forms. The UK Brain Bank criteria were implemented as a Diagnostic Checklist (Pankratz et al., 2002) and all individuals included for sequencing met the modified UK Brain Bank criteria. The modified criteria allows for a family history of PD.

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0086282 (Family member)
    SNOMED
    303071001
    LOINC
    LA9277-0
    UMLS CUI [1,2]
    C0220825 (Evaluation)
    LOINC
    LP36377-7
    UMLS CUI [1,3]
    C1516308 (Case Report Form)
    UMLS CUI [1,4]
    C0348026 (Diagnostic)
    SNOMED
    261004008
    LOINC
    LP249287-6
    UMLS CUI [1,5]
    C1707357 (Checklist)
    LOINC
    LP200110-7
    UMLS CUI [1,6]
    C0241889 (Family history (finding))
    SNOMED
    416471007

    Similar models

    Eligibility Criteria

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    Inclusion and exclusion criteria
    Family members were evaluated, whenever possible, in person using a series of standard case report forms. The UK Brain Bank criteria were implemented as a Diagnostic Checklist (Pankratz et al., 2002) and all individuals included for sequencing met the modified UK Brain Bank criteria. The modified criteria allows for a family history of PD.
    Item
    Family members were evaluated, whenever possible, in person using a series of standard case report forms. The UK Brain Bank criteria were implemented as a Diagnostic Checklist (Pankratz et al., 2002) and all individuals included for sequencing met the modified UK Brain Bank criteria. The modified criteria allows for a family history of PD.
    boolean
    C0086282 (UMLS CUI [1,1])
    C0220825 (UMLS CUI [1,2])
    C1516308 (UMLS CUI [1,3])
    C0348026 (UMLS CUI [1,4])
    C1707357 (UMLS CUI [1,5])
    C0241889 (UMLS CUI [1,6])

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