ID

44999

Beskrivning

Principal Investigator: Richard Gilbertson, St. Jude Children's Research Hospital, Memphis, TN, USA MeSH: Medulloblastoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000409 Medulloblastoma is a heterogenous disease made up of at least four distinct subtypes of disease which appear to exploit and disrupt naturally occurring developmental pathways of cellular growth and hindbrain development. To better understand the driver mutations of this disease, we performed whole genome sequencing of 37 medulloblastomas and the corresponding normal DNA of the 37 affected children treated at St. Jude Children's Research Hospital. We have found several novel mutations which appear subtype specific. These mutations were checked for frequency in a separate tumor cohort of 56 children with medulloblastoma, also treated on the St. Jude Medulloblastoma 2003 trial, and were tested in several animal models of medulloblastoma for proof of oncogenic potential.

Länk

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000409

Nyckelord

  1. 2022-07-01 2022-07-01 - Dr. Christian Niklas
  2. 2022-10-12 2022-10-12 - Adrian Schulz
Rättsinnehavare

Richard Gilbertson, St. Jude Children's Research Hospital, Memphis, TN, USA

Uppladdad den

1 juli 2022

DOI

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Licens

Creative Commons BY 4.0

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dbGaP phs000409 Sequencing of Medulloblastoma

Subject ID, consent group, subject source, subject source ID, and affection status of participants with medulloblastoma and involved in the "The Genomic Analysis of Medulloblastoma" project.

pht002735
Beskrivning

pht002735

Subject ID
Beskrivning

SUBJID

Datatyp

string

Alias
UMLS CUI [1,1]
C2348585
Consent group as determined by DAC
Beskrivning

CONSENT

Datatyp

text

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C1257890
Source repository where subjects originate
Beskrivning

SUBJ_SOURCE

Datatyp

string

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C0681850
Subject ID used in the Source Repository
Beskrivning

SOURCE_SUBJID

Datatyp

string

Alias
UMLS CUI [1,1]
C2348585
UMLS CUI [1,2]
C0449416
UMLS CUI [1,3]
C0681850
Case control status of the subject
Beskrivning

AFFECTION_STATUS

Datatyp

text

Alias
UMLS CUI [1,1]
C1698493
UMLS CUI [1,2]
C0449438
UMLS CUI [2,1]
C0009932
UMLS CUI [2,2]
C0449438

Similar models

Subject ID, consent group, subject source, subject source ID, and affection status of participants with medulloblastoma and involved in the "The Genomic Analysis of Medulloblastoma" project.

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
pht002735
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
Item
Consent group as determined by DAC
text
C0021430 (UMLS CUI [1,1])
C1257890 (UMLS CUI [1,2])
Code List
Consent group as determined by DAC
CL Item
General Research Use (GRU) (1)
SUBJ_SOURCE
Item
Source repository where subjects originate
string
C0449416 (UMLS CUI [1,1])
C0681850 (UMLS CUI [1,2])
SOURCE_SUBJID
Item
Subject ID used in the Source Repository
string
C2348585 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
C0681850 (UMLS CUI [1,3])
Item
Case control status of the subject
text
C1698493 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
C0009932 (UMLS CUI [2,1])
C0449438 (UMLS CUI [2,2])
Code List
Case control status of the subject
CL Item
Case (2)

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