ID

44998

Beschrijving

Principal Investigator: Ulrike Peters, PhD, Fred Hutchinson Cancer Research Center, Seattle, WA, USA MeSH: Colorectal Neoplasms,Sequence Analysis, DNA https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000410 This project was designed to use next generation sequencing technology to screen the protein coding regions of the genome for low frequency variants in a panel of high-risk colorectal adenocarcinoma cases. Blood and cell-line DNA for colorectal cancer patients and a subset of quality control samples that had existing whole exome sequence data were analyzed using Illumina HiSeq sequencers. Samples from this project were from participants in the Women's Health Initiative (WHI) and the Diet, Activity, and Lifestyle Study (DALS).

Link

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000410

Trefwoorden

  1. 01-07-22 01-07-22 - Dr. Christian Niklas
  2. 12-10-22 12-10-22 - Adrian Schulz
Houder van rechten

Ulrike Peters, PhD, Fred Hutchinson Cancer Research Center, Seattle, WA, USA

Geüploaded op

1 juli 2022

DOI

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Licentie

Creative Commons BY 4.0

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dbGaP phs000410 Whole Exome Sequencing for Colorectal Cancer

Subject ID, case or control status, age, race, sex, and family history of colorectal cancer among participants involved in the "Whole Exome Sequencing for Colorectal Cancer" project.

pht002450
Beschrijving

pht002450

Unique subject ID
Beschrijving

gecco_id

Datatype

text

Alias
UMLS CUI [1,1]
C2348585
Age at reference
Beschrijving

age

Datatype

text

Maateenheden
  • Years old
Alias
UMLS CUI [1,1]
C0001779
Years old
Case or control status
Beschrijving

caco

Datatype

text

Alias
UMLS CUI [1,1]
C1706256
UMLS CUI [1,2]
C0449438
UMLS CUI [2,1]
C0009932
UMLS CUI [2,2]
C0449438
Gender of participant
Beschrijving

sex

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
Race of participant [white]
Beschrijving

race

Datatype

string

Alias
UMLS CUI [1,1]
C0034510
Whether participant has a positive family history of colorectal cancer
Beschrijving

famhx

Datatype

text

Alias
UMLS CUI [1,1]
C0241889
UMLS CUI [1,2]
C0009402

Similar models

Subject ID, case or control status, age, race, sex, and family history of colorectal cancer among participants involved in the "Whole Exome Sequencing for Colorectal Cancer" project.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht002450
gecco_id
Item
Unique subject ID
text
C2348585 (UMLS CUI [1,1])
age
Item
Age at reference
text
C0001779 (UMLS CUI [1,1])
caco
Item
Case or control status
text
C1706256 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
C0009932 (UMLS CUI [2,1])
C0449438 (UMLS CUI [2,2])
sex
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
race
Item
Race of participant [white]
string
C0034510 (UMLS CUI [1,1])
famhx
Item
Whether participant has a positive family history of colorectal cancer
text
C0241889 (UMLS CUI [1,1])
C0009402 (UMLS CUI [1,2])

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