ID

44998

Description

Principal Investigator: Ulrike Peters, PhD, Fred Hutchinson Cancer Research Center, Seattle, WA, USA MeSH: Colorectal Neoplasms,Sequence Analysis, DNA https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000410 This project was designed to use next generation sequencing technology to screen the protein coding regions of the genome for low frequency variants in a panel of high-risk colorectal adenocarcinoma cases. Blood and cell-line DNA for colorectal cancer patients and a subset of quality control samples that had existing whole exome sequence data were analyzed using Illumina HiSeq sequencers. Samples from this project were from participants in the Women's Health Initiative (WHI) and the Diet, Activity, and Lifestyle Study (DALS).

Lien

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000410

Mots-clés

  1. 01/07/2022 01/07/2022 - Dr. Christian Niklas
  2. 12/10/2022 12/10/2022 - Adrian Schulz
Détendeur de droits

Ulrike Peters, PhD, Fred Hutchinson Cancer Research Center, Seattle, WA, USA

Téléchargé le

1 juillet 2022

DOI

Pour une demande vous connecter.

Licence

Creative Commons BY 4.0

Modèle Commentaires :

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dbGaP phs000410 Whole Exome Sequencing for Colorectal Cancer

Subject ID, subject source, subject source ID, consent group and affection status of participants involved in the " Whole Exome Sequencing for Colorectal Cancer" project.

pht002448
Description

pht002448

GECCO ID
Description

gecco_id

Type de données

text

Alias
UMLS CUI [1,1]
C2348585
Consent group as determined by DAC
Description

consent

Type de données

text

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C1257890
Source repository where subjects originate [Coriell, WHI_SHARe]
Description

subj_source

Type de données

string

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C0681850
Subject ID used in the Source Repository [for Coriell, dbGaP subject ids for WHI participants]
Description

source_subjid

Type de données

string

Alias
UMLS CUI [1,1]
C2348585
UMLS CUI [1,2]
C0449416
UMLS CUI [1,3]
C0681850
Case control status of the subject
Description

affection_status

Type de données

text

Alias
UMLS CUI [1,1]
C1706256
UMLS CUI [1,2]
C0449438
UMLS CUI [2,1]
C0009932
UMLS CUI [2,2]
C0449438

Similar models

Subject ID, subject source, subject source ID, consent group and affection status of participants involved in the " Whole Exome Sequencing for Colorectal Cancer" project.

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht002448
gecco_id
Item
GECCO ID
text
C2348585 (UMLS CUI [1,1])
Item
Consent group as determined by DAC
text
C0021430 (UMLS CUI [1,1])
C1257890 (UMLS CUI [1,2])
Code List
Consent group as determined by DAC
CL Item
General Research Use (MDS) (GRU-MDS) (1)
CL Item
General Research Use (NPU, MDS) (GRU-NPU-MDS) (2)
subj_source
Item
Source repository where subjects originate [Coriell, WHI_SHARe]
string
C0449416 (UMLS CUI [1,1])
C0681850 (UMLS CUI [1,2])
source_subjid
Item
Subject ID used in the Source Repository [for Coriell, dbGaP subject ids for WHI participants]
string
C2348585 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
C0681850 (UMLS CUI [1,3])
Item
Case control status of the subject
text
C1706256 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
C0009932 (UMLS CUI [2,1])
C0449438 (UMLS CUI [2,2])
Code List
Case control status of the subject
CL Item
Control (0)
CL Item
Case (1)
CL Item
Other (3)

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