ID

44991

Description

Principal Investigator: David Altshuler, MD, PhD, Department of Molecular Biology and Center for Human Genetic Research, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA MeSH: Myocardial Infarction https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000294 Myocardial infarction (MI) is a common complex disease and the leading cause of death and disability worldwide. The genetic basis of this disease is largely unknown. It has been thought that early-onset MI events would have a substantially greater heritability, thus making DNA collections with younger individuals desirable. More recently, genome-wide association studies have become feasible through the development of whole genome arrays and a large catalogue of common variants reported in the International HapMap database. This study aims to use Affymetrix genotyping platform to do a whole genome scan in 3000 early-onset MI cases and 3000 matched controls from 6 study collection sites.

Link

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000294

Keywords

  1. 6/23/22 6/23/22 - Dr. Christian Niklas
  2. 10/12/22 10/12/22 - Adrian Schulz
Copyright Holder

David Altshuler, MD, PhD, Department of Molecular Biology and Center for Human Genetic Research, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA

Uploaded on

June 23, 2022

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000294 STAMPEED: Myocardial Infarction Genetics Consortium (MIGen)

This is a subject phenotype table of early-onset myocardial infarction (MI) cases and controls. Variables included are sex of subject, MI status and age of MI onset, study center, and principal component clusters 1-7.

pht001536
Description

pht001536

Familyid
Description

famid

Data type

string

Alias
UMLS CUI [1,1]
C0015576
UMLS CUI [1,2]
C2348585
SubjectID
Description

subjID

Data type

string

Alias
UMLS CUI [1,1]
C2348585
MI status
Description

affection

Data type

text

Alias
UMLS CUI [1,1]
C0027051
UMLS CUI [1,2]
C0449438
Age of MI onset
Description

XAGEEVENT

Data type

text

Measurement units
  • years
Alias
UMLS CUI [1,1]
C0489577
years
Sex
Description

sex

Data type

text

Alias
UMLS CUI [1,1]
C0079399
Study Center
Description

Study1

Data type

text

Alias
UMLS CUI [1,1]
C2347449
Cluster1
Description

SC1

Data type

text

Alias
UMLS CUI [1,1]
C1704332
Cluster2
Description

SC2

Data type

text

Alias
UMLS CUI [1,1]
C1704332
Cluster3
Description

SC3

Data type

text

Alias
UMLS CUI [1,1]
C1704332
Cluster4
Description

SC4

Data type

text

Alias
UMLS CUI [1,1]
C1704332
Cluster5
Description

SC5

Data type

text

Alias
UMLS CUI [1,1]
C1704332
Cluster6
Description

SC6

Data type

text

Alias
UMLS CUI [1,1]
C1704332
Cluster7
Description

SC7

Data type

text

Alias
UMLS CUI [1,1]
C1704332

Similar models

This is a subject phenotype table of early-onset myocardial infarction (MI) cases and controls. Variables included are sex of subject, MI status and age of MI onset, study center, and principal component clusters 1-7.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht001536
famid
Item
Familyid
string
C0015576 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
subjID
Item
SubjectID
string
C2348585 (UMLS CUI [1,1])
Item
MI status
text
C0027051 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
Code List
MI status
CL Item
control (1)
C0009932 (UMLS CUI [1,1])
CL Item
case (2)
C0522476 (UMLS CUI [1,1])
XAGEEVENT
Item
Age of MI onset
text
C0489577 (UMLS CUI [1,1])
Item
Sex
text
C0079399 (UMLS CUI [1,1])
Code List
Sex
CL Item
UNKNOWN (0)
C0439673 (UMLS CUI [1,1])
CL Item
MALE (1)
C0086582 (UMLS CUI [1,1])
CL Item
FEMALE (2)
C0086287 (UMLS CUI [1,1])
Item
Study Center
text
C2347449 (UMLS CUI [1,1])
Code List
Study Center
CL Item
ATVB (1)
CL Item
Finrisk (2)
CL Item
Harps (3)
CL Item
Malmo (4)
CL Item
MGH (5)
CL Item
Regicor (6)
Item
Cluster1
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster1
CL Item
No (1)
CL Item
Yes (2)
Item
Cluster2
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster2
CL Item
No (1)
CL Item
Yes (2)
Item
Cluster3
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster3
CL Item
No (1)
CL Item
Yes (2)
Item
Cluster4
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster4
CL Item
No (1)
CL Item
Yes (2)
Item
Cluster5
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster5
CL Item
No (1)
CL Item
Yes (2)
Item
Cluster6
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster6
CL Item
No (1)
CL Item
Yes (2)
Item
Cluster7
text
C1704332 (UMLS CUI [1,1])
Code List
Cluster7
CL Item
No (1)
CL Item
Yes (2)

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