ID

44957

Description

Principal Investigator: Claire Fraser-Liggett, University of Maryland School of Medicine, Baltimore, MD, USA MeSH: Obesity,Obesity, Morbid https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000258 Emerging evidence that the gut microbiota may contribute in important ways to human health and disease has led us and others to hypothesize that both symbiotic and pathological relationships between gut microbes and their host may be key contributors to obesity and the metabolic complications of obesity. Our "Thrifty Microbiome Hypothesis" poses that gut microbiota play a key role in human energy homeostasis. Specifically, constituents of the gut microbial community may introduce a survival advantage to its host in times of nutrient scarcity, promoting positive energy balance by increasing efficiency of nutrient absorption and improving metabolic efficiency and energy storage. However, in the presence of excess nutrients, fat accretion and obesity may result, and in genetically predisposed individuals, increased fat mass may result in preferential abdominal obesity, ectopic fat deposition (liver, muscle), and metabolic complications of obesity (insulin resistance, hypertension, hyperlipidemia). Furthermore, in the presence of excess nutrients, a pathological transition of the gut microbial community may occur, causing leakage of bacterial products into the intestinal lymphatics and portal circulation, thereby inducing an inflammatory state, further aggravating metabolic syndrome traits and accelerating atherosclerosis. This pathological transition and the extent to which antimicrobial leakage occurs and causes inflammatory and other maladaptive sequelae of obesity may also be influenced by host factors, including genetics. In the proposed study, we will directly test the Thrifty Microbiome Hypothesis by performing detailed genomic and functional assessment of gut microbial communities in intensively phenotyped and genotyped human subjects before and after intentional manipulation of the gut microbiome. To address these hypotheses, five specific aims are proposed: (1) enroll three age- and sex-matched groups from the Old Order Amish: (i) 50 obese subjects (BMI 30 kg/m2) with metabolic syndrome, (ii) 50 obese subjects (BMI 30 kg/m2) without metabolic syndrome, and (iii) 50 non-obese subjects (BMI 25 kg/m2) without metabolic syndrome and characterize the architecture of the gut microbiota from the subjects enrolled in this study by high-throughput sequencing of 16S rRNA genes; (2) characterize the gene content (metagenome) to assess the metabolic potential of the gut microbiota in 75 subjects to determine whether particular genes or pathways are correlated with disease phenotype; (3) characterize the transcriptome in 75 subjects to determine whether differences in gene expression in the gut microbiota are correlated with disease phenotype, (4) determine the effect of manipulation of the gut microbiota with antibiotics on energy homeostasis, inflammation markers, and metabolic syndrome traits in 50 obese subjects with metabolic syndrome and (5) study the relationship between gut microbiota and metabolic and cardiovascular disease traits, weight change, and host genomics in 1,000 Amish already characterized for these traits and in whom 500K Affymetrix SNP chips have already been completed. These studies will provide our deepest understanding to date of the role of gut microbes in terms of 'who's there?', 'what are they doing?', and 'how are they influencing host energy homeostasis, obesity and its metabolic complications? PUBLIC HEALTH RELEVANCE: This study aims to unravel the contribution of the bacteria that normally inhabit the human gastrointestinal tract to the development of obesity, and its more severe metabolic consequences including cardiovascular disease, insulin resistance and Type II diabetes. We will take a multidisciplinary approach to study changes in the structure and function of gut microbial communities in three sets of Old Order Amish patients from Lancaster, Pennsylvania: obese patients, obese patients with metabolic syndrome and non-obese individuals. The Old Order Amish are a genetically closed homogeneous Caucasian population of Central European ancestry ideal for genetic studies. These works have the potential to provide new mechanistic insights into the role of gut microflora in obesity and metabolic syndrome, a disease that is responsible for significant morbidity in the adult population, and may ultimately lead to novel approaches for prevention and treatment of this disorder.

Lien

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000258

Mots-clés

  1. 16/05/2022 16/05/2022 - Dr. Christian Niklas
  2. 12/10/2022 12/10/2022 - Adrian Schulz
Détendeur de droits

Claire Fraser-Liggett, University of Maryland School of Medicine, Baltimore, MD, USA

Téléchargé le

16 mai 2022

DOI

Pour une demande vous connecter.

Licence

Creative Commons BY 4.0

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dbGaP phs000258 Human Gut Microbiome in Amish Obesity

Subject ID, consent group, and affection status of participants with or without obesity.

pht001240
Description

pht001240

Subject ID
Description

SUBJID

Type de données

string

Alias
UMLS CUI [1,1]
C2348585
Consent group as determined by DAC
Description

CONSENT

Type de données

text

Alias
UMLS CUI [1,1]
C0679823
UMLS CUI [1,2]
C1257890
UMLS CUI [1,3]
C0021430
Source repository where subjects originate
Description

SUBJ_SOURCE

Type de données

string

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C0681850
Subject ID used in the Source Repository
Description

SOURCE_SUBJID

Type de données

string

Alias
UMLS CUI [1,1]
C0449416
UMLS CUI [1,2]
C0681850
UMLS CUI [1,3]
C2348585
Case control status of the subject
Description

AFFECTION_STATUS

Type de données

text

Alias
UMLS CUI [1,1]
C0009932
UMLS CUI [1,2]
C1997894
UMLS CUI [2,1]
C1997894
UMLS CUI [2,2]
C0449438
UMLS CUI [2,3]
C0522476

Similar models

Subject ID, consent group, and affection status of participants with or without obesity.

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht001240
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
Item
Consent group as determined by DAC
text
C0679823 (UMLS CUI [1,1])
C1257890 (UMLS CUI [1,2])
C0021430 (UMLS CUI [1,3])
Code List
Consent group as determined by DAC
CL Item
Human Microbiome Research (HMP) (1)
SUBJ_SOURCE
Item
Source repository where subjects originate
string
C0449416 (UMLS CUI [1,1])
C0681850 (UMLS CUI [1,2])
SOURCE_SUBJID
Item
Subject ID used in the Source Repository
string
C0449416 (UMLS CUI [1,1])
C0681850 (UMLS CUI [1,2])
C2348585 (UMLS CUI [1,3])
Item
Case control status of the subject
text
C0009932 (UMLS CUI [1,1])
C1997894 (UMLS CUI [1,2])
C1997894 (UMLS CUI [2,1])
C0449438 (UMLS CUI [2,2])
C0522476 (UMLS CUI [2,3])
Code List
Case control status of the subject
CL Item
Lean (L)
CL Item
Unknown (NULL)
CL Item
Overweight (O)
CL Item
Obese Benign (OB)
CL Item
Obese Malignant (OM)

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