ID

29821

Description

Common Data Elements Myeloid Leukemia (MDS, AML, CML) for use in clinical routine and clinical trial documentation. https://www.ncbi.nlm.nih.gov/pubmed/27577388

Link

https://www.ncbi.nlm.nih.gov/pubmed/27577388

Keywords

  1. 7/27/17 7/27/17 - Julian Varghese
  2. 10/23/17 10/23/17 - Julian Varghese
  3. 1/16/18 1/16/18 - Julian Varghese
  4. 4/21/18 4/21/18 - Julian Varghese
  5. 4/21/18 4/21/18 - Julian Varghese
  6. 9/20/21 9/20/21 -
Copyright Holder

Varghese, Julian

Uploaded on

April 21, 2018

DOI

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License

Creative Commons BY-NC 3.0

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26672_Common Data Elements Myeloid Leukemia (MDS AML CML)

Lab: Cytology/Cytogenetics/Cytochemistry

Lab: Cytology/Cytogenetics/Cytochemistry
Description

Lab: Cytology/Cytogenetics/Cytochemistry

Alias
UMLS CUI-1
C0010802
UMLS CUI-2
C0010819
UMLS CUI-3
C0010741
IPSS-R risk score
Description

IPSS-R risk score

Data type

integer

Alias
UMLS CUI [1]
C2827405
Bone marrow examination/Aspirate/Biopsy
Description

Multiple answers: No

Data type

text

Alias
UMLS CUI [1]
C2238269
Bone marrow examination date
Description

Bone marrow examination date

Data type

date

Alias
UMLS CUI [1,1]
C2238269
UMLS CUI [1,2]
C0011008
Location of bone marrow puncture
Description

Location of bone marrow puncture

Data type

text

Alias
UMLS CUI [1,1]
C0005953
UMLS CUI [1,2]
C0034117
UMLS CUI [1,3]
C1515974
Punctio sicca
Description

Punctio sicca

Data type

boolean

Alias
UMLS CUI [1]
C2238270
Bone marrow cellularity
Description

Bone marrow cellularity

Data type

integer

Measurement units
  • %
Alias
UMLS CUI [1]
C1561532
%
Bone marrow Blasts
Description

Bone marrow Blasts

Data type

integer

Measurement units
  • %
Alias
UMLS CUI [1]
C1982687
%
Bone marrow Basophils
Description

Bone marrow Basophils

Data type

integer

Measurement units
  • %
Alias
UMLS CUI [1]
C1982287
%
Bone marrow Promyelocytes
Description

Bone marrow Promyelocytes

Data type

integer

Measurement units
  • %
Alias
UMLS CUI [1]
C1972113
%
Auer rods
Description

Auer rods

Data type

boolean

Alias
UMLS CUI [1]
C0333828
Karyotype Fish finding according to ISCN
Description

Karyotype Fish finding according to ISCN

Data type

text

Alias
UMLS CUI [1]
C1261273
Monosomal karyotype-
Description

karyotype

Data type

boolean

Alias
UMLS CUI [1]
C0026499
Complex Karyotype
Description

Complex Karyotype-

Data type

boolean

Alias
UMLS CUI [1]
C3273253
FAB Type
Description

Multiple answers: No

Data type

text

Alias
UMLS CUI [1]
C2984084
Cytoplasmic Myeloperoxidase (cMPO)
Description

Cytoplasmic Myeloperoxidase (cMPO)

Data type

boolean

Alias
UMLS CUI [1]
C2698399
Nonspecific esterase (NSE)
Description

Nonspecific esterase (NSE)

Data type

boolean

Alias
UMLS CUI [1]
C0054741
Lysozyme
Description

Lysozyme

Data type

float

Measurement units
  • µg/l
Alias
UMLS CUI [1]
C3541379
µg/l
t(8;21)(q22;q22)
Description

t(8;21)(q22;q22)

Data type

boolean

Alias
UMLS CUI [1]
C1515794
inv(16)(p13.1q22)
Description

inv(16)(p13.1q22)

Data type

boolean

Alias
UMLS CUI [1]
C1533174
t(16;16)(p13.1;q22)
Description

t(16;16)(p13.1;q22)

Data type

boolean

Alias
UMLS CUI [1]
C2828339
t(9;11)(p22;q23)
Description

t(9;11)(p22;q23)

Data type

boolean

Alias
UMLS CUI [1]
C1515800
inv(3)(q21q26.2)
Description

inv(3)(q21q26.2)

Data type

boolean

Alias
UMLS CUI [1]
C1515666
t(3;3)(q21;q26.2)
Description

t(3;3)(q21;q26.2)

Data type

boolean

Alias
UMLS CUI [1]
C1515764
t(6;9)(p23;q34)
Description

t(6;9)(p23;q34)

Data type

boolean

Alias
UMLS CUI [1]
C1515781
t(v;11)(v;q23)
Description

t(v;11)(v;q23)

Data type

boolean

Alias
UMLS CUI [1]
C1515810
t(9;22)(q34;q11)
Description

t(9;22)(q34;q11)

Data type

boolean

Alias
UMLS CUI [1]
C1515809
ASXL1 mutation
Description

ASXL1 mutation

Data type

boolean

Alias
UMLS CUI [1]
C1425445
Major Route ACA
Description

Multiple answers: Yes

Data type

text

Correlation of cytogenetic and molecular genetic data in AML (Doehner et al, 2010)
Description

Multiple answers: Yes

Data type

text

Similar models

Lab: Cytology/Cytogenetics/Cytochemistry

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Lab: Cytology/Cytogenetics/Cytochemistry
C0010802 (UMLS CUI-1)
C0010819 (UMLS CUI-2)
C0010741 (UMLS CUI-3)
IPSS-R risk score
Item
IPSS-R risk score
integer
C2827405 (UMLS CUI [1])
Item
Bone marrow examination/Aspirate/Biopsy
text
C2238269 (UMLS CUI [1])
Code List
Bone marrow examination/Aspirate/Biopsy
CL Item
Biopsy (Biopsy)
CL Item
Aspirate (Aspirate)
Bone marrow examination date
Item
Bone marrow examination date
date
C2238269 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
Location of bone marrow puncture
Item
Location of bone marrow puncture
text
C0005953 (UMLS CUI [1,1])
C0034117 (UMLS CUI [1,2])
C1515974 (UMLS CUI [1,3])
Punctio sicca
Item
Punctio sicca
boolean
C2238270 (UMLS CUI [1])
Bone marrow cellularity
Item
Bone marrow cellularity
integer
C1561532 (UMLS CUI [1])
Bone marrow Blasts
Item
Bone marrow Blasts
integer
C1982687 (UMLS CUI [1])
Bone marrow Basophils
Item
Bone marrow Basophils
integer
C1982287 (UMLS CUI [1])
Bone marrow Promyelocytes
Item
Bone marrow Promyelocytes
integer
C1972113 (UMLS CUI [1])
Auer rods
Item
Auer rods
boolean
C0333828 (UMLS CUI [1])
Karyotype Fish finding according to ISCN
Item
Karyotype Fish finding according to ISCN
text
C1261273 (UMLS CUI [1])
karyotype
Item
Monosomal karyotype-
boolean
C0026499 (UMLS CUI [1])
Complex Karyotype-
Item
Complex Karyotype
boolean
C3273253 (UMLS CUI [1])
Item
FAB Type
text
C2984084 (UMLS CUI [1])
Code List
FAB Type
CL Item
M0 (M0)
CL Item
M1 (M1)
CL Item
M2 (M2)
CL Item
M3 (M3)
CL Item
M4 (M4)
CL Item
M4eo (M4eo)
CL Item
M5 (M5)
CL Item
M5a (M5a)
CL Item
M5b (M5b)
CL Item
M6 (M6)
CL Item
M7 (M7)
CL Item
AML (not M3) (AML (not M3))
CL Item
RA (RA)
CL Item
RARS (RARS)
CL Item
RAEBRAEB-t (RAEBRAEB-t)
CL Item
CMML (CMML)
CL Item
Unknown (Unknown)
Cytoplasmic Myeloperoxidase (cMPO)
Item
Cytoplasmic Myeloperoxidase (cMPO)
boolean
C2698399 (UMLS CUI [1])
Nonspecific esterase (NSE)
Item
Nonspecific esterase (NSE)
boolean
C0054741 (UMLS CUI [1])
Lysozyme
Item
Lysozyme
float
C3541379 (UMLS CUI [1])
t(8;21)(q22;q22)
Item
t(8;21)(q22;q22)
boolean
C1515794 (UMLS CUI [1])
inv(16)(p13.1q22)
Item
inv(16)(p13.1q22)
boolean
C1533174 (UMLS CUI [1])
t(16;16)(p13.1;q22)
Item
t(16;16)(p13.1;q22)
boolean
C2828339 (UMLS CUI [1])
t(9;11)(p22;q23)
Item
t(9;11)(p22;q23)
boolean
C1515800 (UMLS CUI [1])
inv(3)(q21q26.2)
Item
inv(3)(q21q26.2)
boolean
C1515666 (UMLS CUI [1])
t(3;3)(q21;q26.2)
Item
t(3;3)(q21;q26.2)
boolean
C1515764 (UMLS CUI [1])
t(6;9)(p23;q34)
Item
t(6;9)(p23;q34)
boolean
C1515781 (UMLS CUI [1])
t(v;11)(v;q23)
Item
t(v;11)(v;q23)
boolean
C1515810 (UMLS CUI [1])
t(9;22)(q34;q11)
Item
t(9;22)(q34;q11)
boolean
C1515809 (UMLS CUI [1])
ASXL1 mutation
Item
ASXL1 mutation
boolean
C1425445 (UMLS CUI [1])
Item
Major Route ACA
text
Code List
Major Route ACA
CL Item
Trisomy 8 (Trisomy 8)
CL Item
Trisomy 19 (Trisomy 19)
CL Item
Trisomy 22 (Trisomy 22)
CL Item
Isochromosom 17 (Isochromosom 17)
Item
Correlation of cytogenetic and molecular genetic data in AML (Doehner et al, 2010)
text
Code List
Correlation of cytogenetic and molecular genetic data in AML (Doehner et al, 2010)
CL Item
Favorable (Favorable)
CL Item
Intermediate-1 (Intermediate-1)
CL Item
Intermediate-2 (Intermediate-2)
CL Item
Adverse (Adverse)

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