ID

28732

Description

HICDEP stands for HIV Cohorts Data Exchange Protocol. The HIV Cohorts Data Exchange Protocol (HICDEP) is a protocol that allows for simple sharing of data from HIV cohorts by providing a standard format for datasets. It is used by several major HIV Cohort Collaborations such as CASCADE, COHERE, EuroSIDA, PENTA, EPPICC ART-CC and D:A:D. Its first version was presented at the 7th International Workshop on HIV Observational Databases in March 29–30, 2003, Fiuggi, Italy, and a summary was published in Antiviral Therapy. The specification currently consists of 27 tables in a relational structure which cover most medical aspects of HIV patient histories used in clinical research, including pediatric aspects. Subform Descriptions: -tblCEP - Clinical Events and Procedures: holds type and date of adverse events including serious non-AIDS conditions -tblART- Antiretroviral treatment: holds type of antiretroviral drug, start and stop dates and reason for stopping -tblBAS - Basic clinical, background and demographic information: holds basic information such as demographics, basic clinical information, date of AIDS diagnosis, death and drop-out information -tblDELIVERY_CHILD - Delivery information related to the child(ren): This table holds information about a delivery specific to a child. Mother-specific data is kept in tblDELIVERY_MUM. -tblDELIVERY_MUM - Delivery information related to the mother: This table contains information about the delivery specific to the mother. Child-specific information is recorded in tblDELIVERY_CHILD instead. -tblDIS - Opportunistic infections: holds type and date of CDC-C diseases. -tblLAB - Laboratory values: holds type, date, value and unit of laboratory tests -tblLAB_BP - Laboratory values - Blood pressure: holds date, diastolic and systolic values and unit of blood pressure measurements. -tblLAB_CD4 - Laboratory values: holds date and value of CD4 measurements. -tblLAB_RNA - Laboratory values: holds date, value, detection limit and type of viral assay. -tblLAB_RES - Resistance testing: holds background information on the resistance test, laboratory, library, kit, software and type of test -tblLAB_RES_LVL_1 - Nucleotide sequences (PRO, RT, GP41, GP120): holds nucleoside sequence for the PRO and RT sequences. No entry is made if the test was a phenotype test. -tblLAB_RES_LVL_2 - Mutations: holds mutations and positions of PRO and RT sequences. -tblLAB_RES_LVL_3 - Resistance test result: holds resistance result in relation to antiretroviral drug. tblLAB_VIRO - Laboratory values - viro-/serology: holds test results for viro-/serological tests (hepatitis etc.) -tblLTFU - Death and drop-out: holds data in death and drop-out -tblMED - Other medication: holds type, start and stop dates for other medication/treatments. -tblNEWBORN - Newborn: holds information related to newborns -tblNEWBORN_ABNORM - Abnormalities: Abnormalities in newborns are recorded here, one abnormality per row. The absence of a record is to be interpreted as "unknown whether the abnormality existed" since most cohorts only record positive events. -tblOVERLAP - Cross-cohort identification: holds information on the patient's participation in other cohorts -tblPREG - Pregnancy: holds general pregnancy-related information -tblPREG_OBS - Obstetrical problems during pregnancy: This table describes problems during a pregnancy. Abnormalities in newborns are recorded in tblNEWBORN_ABNORM instead. -tblPREG_OUT - Pregnancy outcome: This table describes outcomes of pregnancies described in tblPREG. -tblREFILL - Prescription refill data: holds drug, refill date and supply of prescriptions -tblSAMPLES - Blood Samples: This table contains information on the storage of blood, urine and other samples stored in a laboratory. -tblVIS - Basic follow-up/visit related data: holds visit related information such as weight, wasting, smoking, occupational status etc.

Keywords

  1. 1/29/18 1/29/18 -
  2. 1/29/18 1/29/18 -
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HICDEP

Uploaded on

January 29, 2018

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Creative Commons BY-NC 3.0

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HICDEP

Clinical Events and Procedures (tblCEP)

Clinical Events and Procedures
Description

Clinical Events and Procedures

Alias
UMLS CUI-1
C0877248
UMLS CUI-2
C0184661
UMLS CUI-3
C0019682
Event ID
Description

Event ID

Data type

integer

Alias
UMLS CUI [1,1]
C0877248
UMLS CUI [1,2]
C0600091
Patient ID
Description

Patient

Data type

text

Alias
UMLS CUI [1]
C2348585
Date of event
Description

CEP-D

Data type

date

Alias
UMLS CUI [1,1]
C0877248
UMLS CUI [1,2]
C0011008
Type of event
Description

CEP_ID

Data type

text

Alias
UMLS CUI [1,1]
C0877248
UMLS CUI [1,2]
C0332307
Further specification of event
Description

CEP_SPEC

Data type

text

Alias
UMLS CUI [1,1]
C0877248
UMLS CUI [1,2]
C2348235
Depending on CEP_ID and CEP_SPEC: value of given event
Description

CEP_V

Data type

integer

Alias
UMLS CUI [1,1]
C0877248
UMLS CUI [1,2]
C2348235
whether the source documentation is available
Description

SRCDOC_Y

Data type

integer

Alias
UMLS CUI [1,1]
C0920316
UMLS CUI [1,2]
C0449416
Date for source documentation verification
Description

SRCDOC_D

Data type

date

Alias
UMLS CUI [1,1]
C0920316
UMLS CUI [1,2]
C0449416
UMLS CUI [1,3]
C0011008
Has the monitor verified the source documentation?
Description

VERIFY_Y

Data type

integer

Alias
UMLS CUI [1,1]
C1711411
UMLS CUI [1,2]
C0920316
UMLS CUI [1,3]
C0449416
Date for monitor verification
Description

VERIFY_D

Data type

date

Alias
UMLS CUI [1,1]
C1711411
UMLS CUI [1,2]
C0920316
UMLS CUI [1,3]
C0449416
UMLS CUI [1,4]
C0011008
final verification/approval
Description

APPROV_Y

Data type

integer

Alias
UMLS CUI [1,1]
C1711411
UMLS CUI [1,2]
C0920316
UMLS CUI [1,3]
C0449416
Final verification date
Description

APPROV_D

Data type

date

Alias
UMLS CUI [1,1]
C1711411
UMLS CUI [1,2]
C0920316
UMLS CUI [1,3]
C0449416
UMLS CUI [1,4]
C0011008
Signature for final verification
Description

APPROV_S

Data type

text

Alias
UMLS CUI [1,1]
C1519316
UMLS CUI [1,2]
C1711411
Has the patient had an event?
Description

CEP_Y

Data type

integer

Alias
UMLS CUI [1]
C0877248
Full name of the event
Description

CEP_NAME

Data type

text

Alias
UMLS CUI [1]
C0877248
Full description of the event
Description

CEP_DESCRIP

Data type

text

Alias
UMLS CUI [1,1]
C0877248
UMLS CUI [1,2]
C0678257
Relation to treatment
Description

CEP_R_Y

Data type

integer

Alias
UMLS CUI [1]
C1706735

Similar models

Clinical Events and Procedures (tblCEP)

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Clinical Events and Procedures
C0877248 (UMLS CUI-1)
C0184661 (UMLS CUI-2)
C0019682 (UMLS CUI-3)
Event ID
Item
Event ID
integer
C0877248 (UMLS CUI [1,1])
C0600091 (UMLS CUI [1,2])
Patient
Item
Patient ID
text
C2348585 (UMLS CUI [1])
CEP-D
Item
Date of event
date
C0877248 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
Item
Type of event
text
C0877248 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
Code List
Type of event
CL Item
Acute myocardial infarction (AMI)
CL Item
Bacteremia (BACT)
CL Item
Bartonellosis (BART)
CL Item
Cervical cerclage (CERC)
CL Item
Chagas disease (American trypanosomiasis) of the CNS (CHAG)
CL Item
Endocarditis (ENDO)
CL Item
End stage renal disease (ESRD)
CL Item
Hepatorenal syndrome (HESY)
CL Item
Hospitalisation (HOSP)
CL Item
Jaundice (JAUN )
CL Item
Lactic acidosis (LAC)
CL Item
Liver biopsy (LIVB)
CL Item
Liver decomposition (LIVD)
CL Item
Liver transplantation (LIVT)
CL Item
Meningitis (MENI)
CL Item
Microsporidosis diarrhoes (dur. > 1 month) (MCDI)
CL Item
Non-AIDS defining malignancies (NADM)
CL Item
Nocardiosis (NOCA)
CL Item
Oesophageal variceal bleeding (OESO)
CL Item
Ostitis (OSTI)
CL Item
Pancreatitis (PAN)
CL Item
Pneumocystis carinii extrapulmonary (PCE)
CL Item
Penicillium marneffei, disseminated (PMAR)
CL Item
Spontaneous bacterial peritonitis (PERI)
CL Item
Pneumonia (PNEU)
CL Item
Pyelonephritis (PYEL)
CL Item
Rhodococcus equi disease (REQU)
CL Item
Stroke (infarction or haemorrhagia) (STR)
CL Item
Ultrasound imaging of the abdomen (USAB)
CL Item
Ascites (ASCI)
CL Item
Invasive aspergillosis (ASP)
CL Item
Avascular necrosis in the femural head (AVN)
CL Item
Chronic liver disease (CLD)
CL Item
Diabetes mellitus (DIA)
CL Item
Fatal case with insufficient data (FAT)
CL Item
Fibroscan (FIBS)
CL Item
Bone fracture (irrespective of location) (FRA)
CL Item
Hepatic encephalopathy (HEP)
CL Item
Invasive Cardiovascular Procedures (ICP)
CL Item
Admission for the ICU (ICU)
CL Item
Leishmaniasis, visceral (LEIS)
Item
Further specification of event
text
C0877248 (UMLS CUI [1,1])
C2348235 (UMLS CUI [1,2])
Code List
Further specification of event
CL Item
Definitive Myocardial infarction (DAMI)
CL Item
Possible Myocardial infarction (PAMI)
CL Item
no fibrosis (F0)
CL Item
portal fibrosis without septa (F1)
CL Item
portal fibrosis with few septa (F2)
CL Item
numerous septa without cirrhosis (F3)
CL Item
cirrhosis (F4)
CL Item
Hepatic encephalopathy stage I (I)
CL Item
Hepatic encephalopathy stage II (II)
CL Item
Hepatic encephalopathy stage III (III)
CL Item
Hepatic encephalopathy stage IV (IV)
CL Item
Hepatic encephalopathy stage III or IV (III+IV)
CL Item
Invasive Cardiovascular Procedures: Coronary angioplasty/stenting (ANG)
CL Item
Invasive Cardiovascular Procedures: Coronary artery by-pass grafting (BYP)
CL Item
Invasive Cardiovascular Procedures: Carotic endarterectomy (END)
CL Item
Leukemia: Acute lymphoid (ALL)
CL Item
Leukemia: Acute myeloid (AML)
CL Item
Anal dysplasia, grade 2 or higher (ANAL)
CL Item
Anal cancer (ANUS)
CL Item
Bladder cancer (BLAD)
CL Item
Breast cancer (BRCA)
CL Item
Brain cancer (BRAIN)
CL Item
Cervical dysplasia/carcinoma in situ, grade 2 or higher (CERV)
CL Item
Leukemia: Chronic lymphoid (CLL)
CL Item
Leukemia: Chronic myeloid (CML)
CL Item
Colon cancer (COLO)
CL Item
Connective tissue cancer (COTC)
CL Item
Hodgkin lymphoma (HDL)
CL Item
Head and neck cancer (HENE)
CL Item
Kidney cancer (KIDN)
CL Item
Leukemia: unspecified (LEUK)
CL Item
Lip cancer (LIPC)
CL Item
Liver cancer (LIVR)
CL Item
Lung cancer (LUNG)
CL Item
Malignant melanoma (MALM)
CL Item
Metastasis: of adenocarcinoma (MEAC)
CL Item
Metastasis: of other cancertype (MEOC)
CL Item
Metastasis: of squamuos cell carcinoma (MESC)
CL Item
Metastasis: unspecified (META)
CL Item
Multiple myeloma (MULM)
CL Item
Penile cancer (PENC)
CL Item
Prostate cancer (PROS)
CL Item
Rectum cancer (RECT)
CL Item
Stomach cancer (STOM)
CL Item
Testicular seminoma (TESE)
CL Item
Uterus cancer (UTER)
CL Item
Stroke: Haemorrhagia (SHAE)
CL Item
Stroke: Infarction (SINF)
CL Item
Stroke: Unknown (SUNK)
CEP_V
Item
Depending on CEP_ID and CEP_SPEC: value of given event
integer
C0877248 (UMLS CUI [1,1])
C2348235 (UMLS CUI [1,2])
Item
whether the source documentation is available
integer
C0920316 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
Code List
whether the source documentation is available
CL Item
No (0)
CL Item
Yes (1)
SRCDOC_D
Item
Date for source documentation verification
date
C0920316 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
C0011008 (UMLS CUI [1,3])
Item
Has the monitor verified the source documentation?
integer
C1711411 (UMLS CUI [1,1])
C0920316 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
Code List
Has the monitor verified the source documentation?
CL Item
No (0)
CL Item
Yes (1)
VERIFY_D
Item
Date for monitor verification
date
C1711411 (UMLS CUI [1,1])
C0920316 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
C0011008 (UMLS CUI [1,4])
Item
final verification/approval
integer
C1711411 (UMLS CUI [1,1])
C0920316 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
Code List
final verification/approval
CL Item
No (0)
CL Item
Yes (1)
APPROV_D
Item
Final verification date
date
C1711411 (UMLS CUI [1,1])
C0920316 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
C0011008 (UMLS CUI [1,4])
APPROV_S
Item
Signature for final verification
text
C1519316 (UMLS CUI [1,1])
C1711411 (UMLS CUI [1,2])
Item
Has the patient had an event?
integer
C0877248 (UMLS CUI [1])
Code List
Has the patient had an event?
CL Item
No (0)
CL Item
Yes (1)
CL Item
Unknown (9)
CEP_NAME
Item
Full name of the event
text
C0877248 (UMLS CUI [1])
CEP_DESCRIP
Item
Full description of the event
text
C0877248 (UMLS CUI [1,1])
C0678257 (UMLS CUI [1,2])
Item
Relation to treatment
integer
C1706735 (UMLS CUI [1])
Code List
Relation to treatment
CL Item
not related (0)
CL Item
definitive (1)
CL Item
remote/unlikely (2)
CL Item
possible (3)
CL Item
probable (4)

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