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ID

28732

Description

HICDEP stands for HIV Cohorts Data Exchange Protocol. The HIV Cohorts Data Exchange Protocol (HICDEP) is a protocol that allows for simple sharing of data from HIV cohorts by providing a standard format for datasets. It is used by several major HIV Cohort Collaborations such as CASCADE, COHERE, EuroSIDA, PENTA, EPPICC ART-CC and D:A:D. Its first version was presented at the 7th International Workshop on HIV Observational Databases in March 29–30, 2003, Fiuggi, Italy, and a summary was published in Antiviral Therapy. The specification currently consists of 27 tables in a relational structure which cover most medical aspects of HIV patient histories used in clinical research, including pediatric aspects. Subform Descriptions: -tblCEP - Clinical Events and Procedures: holds type and date of adverse events including serious non-AIDS conditions -tblART- Antiretroviral treatment: holds type of antiretroviral drug, start and stop dates and reason for stopping -tblBAS - Basic clinical, background and demographic information: holds basic information such as demographics, basic clinical information, date of AIDS diagnosis, death and drop-out information -tblDELIVERY_CHILD - Delivery information related to the child(ren): This table holds information about a delivery specific to a child. Mother-specific data is kept in tblDELIVERY_MUM. -tblDELIVERY_MUM - Delivery information related to the mother: This table contains information about the delivery specific to the mother. Child-specific information is recorded in tblDELIVERY_CHILD instead. -tblDIS - Opportunistic infections: holds type and date of CDC-C diseases. -tblLAB - Laboratory values: holds type, date, value and unit of laboratory tests -tblLAB_BP - Laboratory values - Blood pressure: holds date, diastolic and systolic values and unit of blood pressure measurements. -tblLAB_CD4 - Laboratory values: holds date and value of CD4 measurements. -tblLAB_RNA - Laboratory values: holds date, value, detection limit and type of viral assay. -tblLAB_RES - Resistance testing: holds background information on the resistance test, laboratory, library, kit, software and type of test -tblLAB_RES_LVL_1 - Nucleotide sequences (PRO, RT, GP41, GP120): holds nucleoside sequence for the PRO and RT sequences. No entry is made if the test was a phenotype test. -tblLAB_RES_LVL_2 - Mutations: holds mutations and positions of PRO and RT sequences. -tblLAB_RES_LVL_3 - Resistance test result: holds resistance result in relation to antiretroviral drug. tblLAB_VIRO - Laboratory values - viro-/serology: holds test results for viro-/serological tests (hepatitis etc.) -tblLTFU - Death and drop-out: holds data in death and drop-out -tblMED - Other medication: holds type, start and stop dates for other medication/treatments. -tblNEWBORN - Newborn: holds information related to newborns -tblNEWBORN_ABNORM - Abnormalities: Abnormalities in newborns are recorded here, one abnormality per row. The absence of a record is to be interpreted as "unknown whether the abnormality existed" since most cohorts only record positive events. -tblOVERLAP - Cross-cohort identification: holds information on the patient's participation in other cohorts -tblPREG - Pregnancy: holds general pregnancy-related information -tblPREG_OBS - Obstetrical problems during pregnancy: This table describes problems during a pregnancy. Abnormalities in newborns are recorded in tblNEWBORN_ABNORM instead. -tblPREG_OUT - Pregnancy outcome: This table describes outcomes of pregnancies described in tblPREG. -tblREFILL - Prescription refill data: holds drug, refill date and supply of prescriptions -tblSAMPLES - Blood Samples: This table contains information on the storage of blood, urine and other samples stored in a laboratory. -tblVIS - Basic follow-up/visit related data: holds visit related information such as weight, wasting, smoking, occupational status etc.

Keywords

  1. 1/29/18 1/29/18 -
  2. 1/29/18 1/29/18 -
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HICDEP

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January 29, 2018

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Creative Commons BY-NC 3.0

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    HICDEP

    Clinical Events and Procedures (tblCEP)

    Clinical Events and Procedures
    Description

    Clinical Events and Procedures

    Alias
    UMLS CUI-1
    C0877248
    UMLS CUI-2
    C0184661
    UMLS CUI-3
    C0019682
    Event ID
    Description

    Event ID

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0877248
    UMLS CUI [1,2]
    C0600091
    Patient ID
    Description

    Patient

    Data type

    text

    Alias
    UMLS CUI [1]
    C2348585
    Date of event
    Description

    CEP-D

    Data type

    date

    Alias
    UMLS CUI [1,1]
    C0877248
    UMLS CUI [1,2]
    C0011008
    Type of event
    Description

    CEP_ID

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0877248
    UMLS CUI [1,2]
    C0332307
    Further specification of event
    Description

    CEP_SPEC

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0877248
    UMLS CUI [1,2]
    C2348235
    Depending on CEP_ID and CEP_SPEC: value of given event
    Description

    CEP_V

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0877248
    UMLS CUI [1,2]
    C2348235
    whether the source documentation is available
    Description

    SRCDOC_Y

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0920316
    UMLS CUI [1,2]
    C0449416
    Date for source documentation verification
    Description

    SRCDOC_D

    Data type

    date

    Alias
    UMLS CUI [1,1]
    C0920316
    UMLS CUI [1,2]
    C0449416
    UMLS CUI [1,3]
    C0011008
    Has the monitor verified the source documentation?
    Description

    VERIFY_Y

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1711411
    UMLS CUI [1,2]
    C0920316
    UMLS CUI [1,3]
    C0449416
    Date for monitor verification
    Description

    VERIFY_D

    Data type

    date

    Alias
    UMLS CUI [1,1]
    C1711411
    UMLS CUI [1,2]
    C0920316
    UMLS CUI [1,3]
    C0449416
    UMLS CUI [1,4]
    C0011008
    final verification/approval
    Description

    APPROV_Y

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1711411
    UMLS CUI [1,2]
    C0920316
    UMLS CUI [1,3]
    C0449416
    Final verification date
    Description

    APPROV_D

    Data type

    date

    Alias
    UMLS CUI [1,1]
    C1711411
    UMLS CUI [1,2]
    C0920316
    UMLS CUI [1,3]
    C0449416
    UMLS CUI [1,4]
    C0011008
    Signature for final verification
    Description

    APPROV_S

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C1519316
    UMLS CUI [1,2]
    C1711411
    Has the patient had an event?
    Description

    CEP_Y

    Data type

    integer

    Alias
    UMLS CUI [1]
    C0877248
    Full name of the event
    Description

    CEP_NAME

    Data type

    text

    Alias
    UMLS CUI [1]
    C0877248
    Full description of the event
    Description

    CEP_DESCRIP

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0877248
    UMLS CUI [1,2]
    C0678257
    Relation to treatment
    Description

    CEP_R_Y

    Data type

    integer

    Alias
    UMLS CUI [1]
    C1706735

    Similar models

    Clinical Events and Procedures (tblCEP)

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    Clinical Events and Procedures
    C0877248 (UMLS CUI-1)
    C0184661 (UMLS CUI-2)
    C0019682 (UMLS CUI-3)
    Event ID
    Item
    Event ID
    integer
    C0877248 (UMLS CUI [1,1])
    C0600091 (UMLS CUI [1,2])
    Patient
    Item
    Patient ID
    text
    C2348585 (UMLS CUI [1])
    CEP-D
    Item
    Date of event
    date
    C0877248 (UMLS CUI [1,1])
    C0011008 (UMLS CUI [1,2])
    Item
    Type of event
    text
    C0877248 (UMLS CUI [1,1])
    C0332307 (UMLS CUI [1,2])
    Code List
    Type of event
    CL Item
    Acute myocardial infarction (AMI)
    CL Item
    Bacteremia (BACT)
    CL Item
    Bartonellosis (BART)
    CL Item
    Cervical cerclage (CERC)
    CL Item
    Chagas disease (American trypanosomiasis) of the CNS (CHAG)
    CL Item
    Endocarditis (ENDO)
    CL Item
    End stage renal disease (ESRD)
    CL Item
    Hepatorenal syndrome (HESY)
    CL Item
    Hospitalisation (HOSP)
    CL Item
    Jaundice (JAUN )
    CL Item
    Lactic acidosis (LAC)
    CL Item
    Liver biopsy (LIVB)
    CL Item
    Liver decomposition (LIVD)
    CL Item
    Liver transplantation (LIVT)
    CL Item
    Meningitis (MENI)
    CL Item
    Microsporidosis diarrhoes (dur. > 1 month) (MCDI)
    CL Item
    Non-AIDS defining malignancies (NADM)
    CL Item
    Nocardiosis (NOCA)
    CL Item
    Oesophageal variceal bleeding (OESO)
    CL Item
    Ostitis (OSTI)
    CL Item
    Pancreatitis (PAN)
    CL Item
    Pneumocystis carinii extrapulmonary (PCE)
    CL Item
    Penicillium marneffei, disseminated (PMAR)
    CL Item
    Spontaneous bacterial peritonitis (PERI)
    CL Item
    Pneumonia (PNEU)
    CL Item
    Pyelonephritis (PYEL)
    CL Item
    Rhodococcus equi disease (REQU)
    CL Item
    Stroke (infarction or haemorrhagia) (STR)
    CL Item
    Ultrasound imaging of the abdomen (USAB)
    CL Item
    Ascites (ASCI)
    CL Item
    Invasive aspergillosis (ASP)
    CL Item
    Avascular necrosis in the femural head (AVN)
    CL Item
    Chronic liver disease (CLD)
    CL Item
    Diabetes mellitus (DIA)
    CL Item
    Fatal case with insufficient data (FAT)
    CL Item
    Fibroscan (FIBS)
    CL Item
    Bone fracture (irrespective of location) (FRA)
    CL Item
    Hepatic encephalopathy (HEP)
    CL Item
    Invasive Cardiovascular Procedures (ICP)
    CL Item
    Admission for the ICU (ICU)
    CL Item
    Leishmaniasis, visceral (LEIS)
    Item
    Further specification of event
    text
    C0877248 (UMLS CUI [1,1])
    C2348235 (UMLS CUI [1,2])
    Code List
    Further specification of event
    CL Item
    Definitive Myocardial infarction (DAMI)
    CL Item
    Possible Myocardial infarction (PAMI)
    CL Item
    no fibrosis (F0)
    CL Item
    portal fibrosis without septa (F1)
    CL Item
    portal fibrosis with few septa (F2)
    CL Item
    numerous septa without cirrhosis (F3)
    CL Item
    cirrhosis (F4)
    CL Item
    Hepatic encephalopathy stage I (I)
    CL Item
    Hepatic encephalopathy stage II (II)
    CL Item
    Hepatic encephalopathy stage III (III)
    CL Item
    Hepatic encephalopathy stage IV (IV)
    CL Item
    Hepatic encephalopathy stage III or IV (III+IV)
    CL Item
    Invasive Cardiovascular Procedures: Coronary angioplasty/stenting (ANG)
    CL Item
    Invasive Cardiovascular Procedures: Coronary artery by-pass grafting (BYP)
    CL Item
    Invasive Cardiovascular Procedures: Carotic endarterectomy (END)
    CL Item
    Leukemia: Acute lymphoid (ALL)
    CL Item
    Leukemia: Acute myeloid (AML)
    CL Item
    Anal dysplasia, grade 2 or higher (ANAL)
    CL Item
    Anal cancer (ANUS)
    CL Item
    Bladder cancer (BLAD)
    CL Item
    Breast cancer (BRCA)
    CL Item
    Brain cancer (BRAIN)
    CL Item
    Cervical dysplasia/carcinoma in situ, grade 2 or higher (CERV)
    CL Item
    Leukemia: Chronic lymphoid (CLL)
    CL Item
    Leukemia: Chronic myeloid (CML)
    CL Item
    Colon cancer (COLO)
    CL Item
    Connective tissue cancer (COTC)
    CL Item
    Hodgkin lymphoma (HDL)
    CL Item
    Head and neck cancer (HENE)
    CL Item
    Kidney cancer (KIDN)
    CL Item
    Leukemia: unspecified (LEUK)
    CL Item
    Lip cancer (LIPC)
    CL Item
    Liver cancer (LIVR)
    CL Item
    Lung cancer (LUNG)
    CL Item
    Malignant melanoma (MALM)
    CL Item
    Metastasis: of adenocarcinoma (MEAC)
    CL Item
    Metastasis: of other cancertype (MEOC)
    CL Item
    Metastasis: of squamuos cell carcinoma (MESC)
    CL Item
    Metastasis: unspecified (META)
    CL Item
    Multiple myeloma (MULM)
    CL Item
    Penile cancer (PENC)
    CL Item
    Prostate cancer (PROS)
    CL Item
    Rectum cancer (RECT)
    CL Item
    Stomach cancer (STOM)
    CL Item
    Testicular seminoma (TESE)
    CL Item
    Uterus cancer (UTER)
    CL Item
    Stroke: Haemorrhagia (SHAE)
    CL Item
    Stroke: Infarction (SINF)
    CL Item
    Stroke: Unknown (SUNK)
    CEP_V
    Item
    Depending on CEP_ID and CEP_SPEC: value of given event
    integer
    C0877248 (UMLS CUI [1,1])
    C2348235 (UMLS CUI [1,2])
    Item
    whether the source documentation is available
    integer
    C0920316 (UMLS CUI [1,1])
    C0449416 (UMLS CUI [1,2])
    Code List
    whether the source documentation is available
    CL Item
    No (0)
    CL Item
    Yes (1)
    SRCDOC_D
    Item
    Date for source documentation verification
    date
    C0920316 (UMLS CUI [1,1])
    C0449416 (UMLS CUI [1,2])
    C0011008 (UMLS CUI [1,3])
    Item
    Has the monitor verified the source documentation?
    integer
    C1711411 (UMLS CUI [1,1])
    C0920316 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])
    Code List
    Has the monitor verified the source documentation?
    CL Item
    No (0)
    CL Item
    Yes (1)
    VERIFY_D
    Item
    Date for monitor verification
    date
    C1711411 (UMLS CUI [1,1])
    C0920316 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])
    C0011008 (UMLS CUI [1,4])
    Item
    final verification/approval
    integer
    C1711411 (UMLS CUI [1,1])
    C0920316 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])
    Code List
    final verification/approval
    CL Item
    No (0)
    CL Item
    Yes (1)
    APPROV_D
    Item
    Final verification date
    date
    C1711411 (UMLS CUI [1,1])
    C0920316 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])
    C0011008 (UMLS CUI [1,4])
    APPROV_S
    Item
    Signature for final verification
    text
    C1519316 (UMLS CUI [1,1])
    C1711411 (UMLS CUI [1,2])
    Item
    Has the patient had an event?
    integer
    C0877248 (UMLS CUI [1])
    Code List
    Has the patient had an event?
    CL Item
    No (0)
    CL Item
    Yes (1)
    CL Item
    Unknown (9)
    CEP_NAME
    Item
    Full name of the event
    text
    C0877248 (UMLS CUI [1])
    CEP_DESCRIP
    Item
    Full description of the event
    text
    C0877248 (UMLS CUI [1,1])
    C0678257 (UMLS CUI [1,2])
    Item
    Relation to treatment
    integer
    C1706735 (UMLS CUI [1])
    Code List
    Relation to treatment
    CL Item
    not related (0)
    CL Item
    definitive (1)
    CL Item
    remote/unlikely (2)
    CL Item
    possible (3)
    CL Item
    probable (4)

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