ID

14641

Description

This protocol provides instructions for drawing, processing, and storing blood for hepatitis B (HBV) from the National Health and Nutrition Examination Survey (NHANES). As multiple tests must be performed to make the most accurate diagnosis of HBV, the protocol also provides basic guidelines to aid comparability among different studies. Toolkit users are referred to the U.S. Food and Drug Administration’s (FDA’s) approved laboratory assays. ODM derived from: https://cde.nlm.nih.gov Primary source: https://www.phenxtoolkit.org/ Recent publication: Hendershot, T., Pan, H., Haines, J., Harlan, W.R., Marazita, M.L., McCarty, C.A., Ramos, E.M., and Hamilton, C.M. (2015) Using the PhenX toolkit to add standard measures to a study. Curr. Protoc. Hum. Genet. 86:1.21.1-1.21.17. doi: 10.1002/0471142905.hg0121s86 Permission to publish granted by Carol M. Hamilton.

Link

https://cde.nlm.nih.gov

Keywords

  1. 4/25/16 4/25/16 - Julian Varghese
Uploaded on

April 25, 2016

DOI

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License

Creative Commons BY-NC 3.0

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Assay for Hepatitis B Protocol PhenX Toolkit

Assay for Hepatitis B Protocol PhenX Toolkit

Exclusion criteria - assays PhenX
Description

Exclusion criteria - assays PhenX

Do you have hemophilia?
Description

hemophilia

Data type

integer

Alias
UMLS CUI [1]
C0684275
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
Description

chemotherapy

Data type

integer

Alias
UMLS CUI [1,1]
C0392920
UMLS CUI [1,2]
C0392920
UMLS CUI [1,3]
C1301732
Process variables for assays PhenX
Description

Process variables for assays PhenX

Exclusion Criteria
Description

exclusion criteria

Data type

text

Alias
UMLS CUI [1]
C0680251
Was blood drawn?
Description

blood drawn done

Data type

boolean

Alias
UMLS CUI [1]
C3166519
Was full sample obtained?
Description

Was full sample obtained?

Data type

boolean

Service comment
Description

service comment

Data type

text

Alias
UMLS CUI [1]
C0485795
Service comment
Description

service comment

Data type

text

Alias
UMLS CUI [1]
C0485795
Repeatability of the assay
Description

repeatability of the assay

Data type

float

Alias
UMLS CUI [1]
C3166274
Coefficient of variation for the assay
Description

coefficient of variation

Data type

float

Alias
UMLS CUI [1]
C3176770
Manufacturer variables for assays PhenX
Description

Manufacturer variables for assays PhenX

Make of the equipment used to perform...
Description

make of the equipment used

Data type

text

Alias
UMLS CUI [1]
C3176779
Manufacturer of the equipment used to perform...
Description

manufacturer of equipment used

Data type

text

Alias
UMLS CUI [1]
C3176781

Similar models

Assay for Hepatitis B Protocol PhenX Toolkit

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Exclusion criteria - assays PhenX
Item
Do you have hemophilia?
integer
C0684275 (UMLS CUI [1])
Code List
Do you have hemophilia?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Refused (3)
CL Item
Don´t know (4)
Item
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
integer
C0392920 (UMLS CUI [1,1])
C0392920 (UMLS CUI [1,2])
C1301732 (UMLS CUI [1,3])
Code List
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Refused (3)
CL Item
Don´t know (4)
Item Group
Process variables for assays PhenX
Item
Exclusion Criteria
text
C0680251 (UMLS CUI [1])
Code List
Exclusion Criteria
CL Item
Hemophilia (1)
CL Item
Received cancer chemotherapy in the last 3 weeks (2)
CL Item
None – proceed with blood draw (3)
blood drawn done
Item
Was blood drawn?
boolean
C3166519 (UMLS CUI [1])
Was full sample obtained?
Item
Was full sample obtained?
boolean
service comment
Item
Service comment
text
C0485795 (UMLS CUI [1])
service comment
Item
Service comment
text
C0485795 (UMLS CUI [1])
repeatability of the assay
Item
Repeatability of the assay
float
C3166274 (UMLS CUI [1])
coefficient of variation
Item
Coefficient of variation for the assay
float
C3176770 (UMLS CUI [1])
Item Group
Manufacturer variables for assays PhenX
make of the equipment used
Item
Make of the equipment used to perform...
text
C3176779 (UMLS CUI [1])
manufacturer of equipment used
Item
Manufacturer of the equipment used to perform...
text
C3176781 (UMLS CUI [1])

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