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Eligibility Criteria

7 forms  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. Subject ID, subject source, source subject ID, and consent group of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    3. Subject ID, sex, monozygous twins, family ID, mother ID, father ID, and sex of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    4. Subject ID, sample ID, and sample use variable obtained from participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    5. Subject ID, array, African Principal Component, East Asian Principal Component, European Principal Component, and Latin Principal Component of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    6. Subject ID, sex, race, affection status, age, BMI, Gleason Summary Score, histologic grading and differentiation, and SEER general summary stage of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    7. Sample ID, package, analyte type, body site where sample was collected, tumor status of sample, and Reagent Kit of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
Inclusion and exclusion criteria
Description

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
Inclusion criteria for the data deposited in dbGaP include all of the following:
Description

Elig.phs001221.v1.p1.1

Data type

boolean

Alias
UMLS CUI [1,1]
C1512693
Males included in KP RPGEH, ProHealth, or CMHS cohorts.
Description

Elig.phs001221.v1.p1.2

Data type

boolean

Alias
UMLS CUI [1,1]
C0086582
UMLS CUI [1,2]
C1512693
UMLS CUI [1,3]
C0205394
UMLS CUI [1,4]
C0008976
UMLS CUI [1,5]
C0599755
Successfully genotyped from extracted DNA. For GWAS, DQC ≥ 0.82; call rate ≥ 0.97 (≥0.95 for African Americans). For EWAS, DQC ≥ 0.75; call rate ≥ 0.95.
Description

Elig.phs001221.v1.p1.3

Data type

boolean

Alias
UMLS CUI [1,1]
C3258067
UMLS CUI [1,2]
C1285573
UMLS CUI [1,3]
C0012854
UMLS CUI [1,4]
C0185115
Provided explicit consent explicitly to have data deposited in NIH-maintained database.
Description

Elig.phs001221.v1.p1.4

Data type

boolean

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C0333562
UMLS CUI [1,3]
C1511726
UMLS CUI [1,4]
C0027468
UMLS CUI [1,5]
C0242356
Exclusion criteria for the data deposited in dbGaP included any of the following:
Description

Elig.phs001221.v1.p1.5

Data type

boolean

Alias
UMLS CUI [1,1]
C0680251
Subject requested withdrawal from study after DNA extraction and genotyping.
Description

Elig.phs001221.v1.p1.6

Data type

boolean

Alias
UMLS CUI [1,1]
C1272683
UMLS CUI [1,2]
C2349954
UMLS CUI [1,3]
C0008976
Validity of link between biospecimen and study participant questionable because of genotype-phenotype discordance, e.g. gender.
Description

Elig.phs001221.v1.p1.7

Data type

boolean

Alias
UMLS CUI [1,1]
C2349101
UMLS CUI [1,2]
C0332241
UMLS CUI [1,3]
C0449379
UMLS CUI [1,4]
C2347026
UMLS CUI [1,5]
C1997894
UMLS CUI [1,6]
C0031437
UMLS CUI [1,7]
C0017431
UMLS CUI [1,8]
C3639994
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Similar models

Eligibility Criteria

7 forms
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. Subject ID, subject source, source subject ID, and consent group of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    3. Subject ID, sex, monozygous twins, family ID, mother ID, father ID, and sex of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    4. Subject ID, sample ID, and sample use variable obtained from participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    5. Subject ID, array, African Principal Component, East Asian Principal Component, European Principal Component, and Latin Principal Component of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    6. Subject ID, sex, race, affection status, age, BMI, Gleason Summary Score, histologic grading and differentiation, and SEER general summary stage of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
    7. Sample ID, package, analyte type, body site where sample was collected, tumor status of sample, and Reagent Kit of participants with or without prostate cancer and involved in the "ProHealth: Kaiser Permanente Genome-wide Association Study of Prostate Cancer" project.
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Elig.phs001221.v1.p1.1
Item
Inclusion criteria for the data deposited in dbGaP include all of the following:
boolean
C1512693 (UMLS CUI [1,1])
Elig.phs001221.v1.p1.2
Item
Males included in KP RPGEH, ProHealth, or CMHS cohorts.
boolean
C0086582 (UMLS CUI [1,1])
C1512693 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
C0008976 (UMLS CUI [1,4])
C0599755 (UMLS CUI [1,5])
Elig.phs001221.v1.p1.3
Item
Successfully genotyped from extracted DNA. For GWAS, DQC ≥ 0.82; call rate ≥ 0.97 (≥0.95 for African Americans). For EWAS, DQC ≥ 0.75; call rate ≥ 0.95.
boolean
C3258067 (UMLS CUI [1,1])
C1285573 (UMLS CUI [1,2])
C0012854 (UMLS CUI [1,3])
C0185115 (UMLS CUI [1,4])
Elig.phs001221.v1.p1.4
Item
Provided explicit consent explicitly to have data deposited in NIH-maintained database.
boolean
C0021430 (UMLS CUI [1,1])
C0333562 (UMLS CUI [1,2])
C1511726 (UMLS CUI [1,3])
C0027468 (UMLS CUI [1,4])
C0242356 (UMLS CUI [1,5])
Elig.phs001221.v1.p1.5
Item
Exclusion criteria for the data deposited in dbGaP included any of the following:
boolean
C0680251 (UMLS CUI [1,1])
Elig.phs001221.v1.p1.6
Item
Subject requested withdrawal from study after DNA extraction and genotyping.
boolean
C1272683 (UMLS CUI [1,1])
C2349954 (UMLS CUI [1,2])
C0008976 (UMLS CUI [1,3])
Elig.phs001221.v1.p1.7
Item
Validity of link between biospecimen and study participant questionable because of genotype-phenotype discordance, e.g. gender.
boolean
C2349101 (UMLS CUI [1,1])
C0332241 (UMLS CUI [1,2])
C0449379 (UMLS CUI [1,3])
C2347026 (UMLS CUI [1,4])
C1997894 (UMLS CUI [1,5])
C0031437 (UMLS CUI [1,6])
C0017431 (UMLS CUI [1,7])
C3639994 (UMLS CUI [1,8])
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