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This sample attributes table contains sample IDs, isolated RNA concentration, RNA integrity number, file name of sequence raw data, body site where sample was collected, analyte type, histological type, disease name, and name of the center which conducted genotyping or sequencing.

5 Formulaires  
pht006543
Description

pht006543

Alias
UMLS CUI [1,1]
C3846158
Sample ID
Description

SAMPLE_ID

Type de données

string

Alias
UMLS CUI [1,1]
C1299222
Concentration of isolated RNA
Description

NG_UL

Type de données

float

Unités de mesure
  • nanogrammes per microlitre
Alias
UMLS CUI [1,1]
C1446561
UMLS CUI [1,2]
C0204727
UMLS CUI [1,3]
C0035668
nanogrammes per microlitre
Concentration of isolated RNA
Description

NMOLE_L

Type de données

float

Unités de mesure
  • nanomoles per litre
Alias
UMLS CUI [1,1]
C1446561
UMLS CUI [1,2]
C0204727
UMLS CUI [1,3]
C0035668
nanomoles per litre
RNA integrity number
Description

RIN

Type de données

string

Alias
UMLS CUI [1,1]
C1882531
File name of sequence raw data file
Description

FASTQ

Type de données

string

Alias
UMLS CUI [1,1]
C1519249
UMLS CUI [1,2]
C4684753
UMLS CUI [1,3]
C0242193
Body site where sample was collected
Description

BODY_SITE

Type de données

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C4744818
Cell or tissue type or subtype of sample
Description

HISTOLOGICAL_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0007634
UMLS CUI [1,3]
C0332307
UMLS CUI [2,1]
C2347026
UMLS CUI [2,2]
C0007634
UMLS CUI [2,3]
C0449560
UMLS CUI [3,1]
C1292533
UMLS CUI [3,2]
C0332307
UMLS CUI [4,1]
C1292533
UMLS CUI [4,2]
C0449560
Name of the disease
Description

DISEASE

Type de données

string

Alias
UMLS CUI [1,1]
C0027365
UMLS CUI [1,2]
C0012634
Name of the center which conducted genotyping
Description

GENOTYPING_CENTER

Type de données

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C5575037
UMLS CUI [1,3]
C1285573
Name of the center which conducted sequencing
Description

SEQUENCING_CENTER

Type de données

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C5575037
UMLS CUI [1,3]
C1561491
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Similar models

This sample attributes table contains sample IDs, isolated RNA concentration, RNA integrity number, file name of sequence raw data, body site where sample was collected, analyte type, histological type, disease name, and name of the center which conducted genotyping or sequencing.

5 Formulaires
Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht006543
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
NG_UL
Item
Concentration of isolated RNA
float
C1446561 (UMLS CUI [1,1])
C0204727 (UMLS CUI [1,2])
C0035668 (UMLS CUI [1,3])
NMOLE_L
Item
Concentration of isolated RNA
float
C1446561 (UMLS CUI [1,1])
C0204727 (UMLS CUI [1,2])
C0035668 (UMLS CUI [1,3])
RIN
Item
RNA integrity number
string
C1882531 (UMLS CUI [1,1])
FASTQ
Item
File name of sequence raw data file
string
C1519249 (UMLS CUI [1,1])
C4684753 (UMLS CUI [1,2])
C0242193 (UMLS CUI [1,3])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
Cell or tissue type or subtype of sample
string
C2347026 (UMLS CUI [1,1])
C0007634 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
C2347026 (UMLS CUI [2,1])
C0007634 (UMLS CUI [2,2])
C0449560 (UMLS CUI [2,3])
C1292533 (UMLS CUI [3,1])
C0332307 (UMLS CUI [3,2])
C1292533 (UMLS CUI [4,1])
C0449560 (UMLS CUI [4,2])
DISEASE
Item
Name of the disease
string
C0027365 (UMLS CUI [1,1])
C0012634 (UMLS CUI [1,2])
GENOTYPING_CENTER
Item
Name of the center which conducted genotyping
string
C1301943 (UMLS CUI [1,1])
C5575037 (UMLS CUI [1,2])
C1285573 (UMLS CUI [1,3])
SEQUENCING_CENTER
Item
Name of the center which conducted sequencing
string
C1301943 (UMLS CUI [1,1])
C5575037 (UMLS CUI [1,2])
C1561491 (UMLS CUI [1,3])
Retour au début de la page