This sample GEO mapping data table includes a mapping of study sample IDs to NCBI Gene Expression Omnibus (GEO) acccesions, type of GEO experiment, brain region, and left or right hemisphere.

pht002404
Beschreibung

pht002404

Sample ID
Beschreibung

SAMPID

Datentyp

text

Alias
UMLS CUI [1,1]
C1299222
GEO accession ID
Beschreibung

GEO_ACC_ID

Datentyp

string

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C0242356
UMLS CUI [1,3]
C1510755
Type of GEO experiment
Beschreibung

GEO_Experiment_Type

Datentyp

text

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C0242356
UMLS CUI [1,3]
C5236594
Brain region
Beschreibung

REGION

Datentyp

text

Alias
UMLS CUI [1,1]
C0006104
UMLS CUI [1,2]
C1515974
Left or right hemisphere
Beschreibung

LEFT_RIGHT

Datentyp

text

Alias
UMLS CUI [1,1]
C0228176
UMLS CUI [2,1]
C0228175

Ähnliche Modelle

This sample GEO mapping data table includes a mapping of study sample IDs to NCBI Gene Expression Omnibus (GEO) acccesions, type of GEO experiment, brain region, and left or right hemisphere.

Name
Typ
Description | Question | Decode (Coded Value)
Datentyp
Alias
Item Group
pht002404
SAMPID
Item
Sample ID
text
C1299222 (UMLS CUI [1,1])
GEO_ACC_ID
Item
GEO accession ID
string
C0017262 (UMLS CUI [1,1])
C0242356 (UMLS CUI [1,2])
C1510755 (UMLS CUI [1,3])
Item
Type of GEO experiment
text
C0017262 (UMLS CUI [1,1])
C0242356 (UMLS CUI [1,2])
C5236594 (UMLS CUI [1,3])
Code List
Type of GEO experiment
CL Item
Expression at exon level (Exon)
CL Item
Expression at gene level (Gene)
Item
Brain region
text
C0006104 (UMLS CUI [1,1])
C1515974 (UMLS CUI [1,2])
Code List
Brain region
CL Item
Primary auditory cortex (A1C)
CL Item
Amygdala (AMY)
CL Item
Cerebellar cortex (CBC)
CL Item
Caudal ganglionic eminence (CGE)
CL Item
Dorsolateral prefrontal cortex (DFC)
CL Item
Diencephalon (DIE)
CL Item
Dorsal thalamus (DTH)
CL Item
Frontal cortex (FC)
CL Item
Hippocampus (HIP)
CL Item
Posterior inferior parietal cortex (IPC)
CL Item
Inferior temporal cortex (ITC)
CL Item
Lateral ganglionic eminence (LGE)
CL Item
Primary motor cortex (M1C)
CL Item
Mediodorsal nucleus of the thalamus (MD)
CL Item
Medial prefrontal cortex (MFC)
CL Item
Medial ganglionic eminence (MGE)
CL Item
Motor-somatosensory cortex (MSC)
CL Item
Occipital cortex (OC)
CL Item
Orbital prefrontal cortex (OFC)
CL Item
Parietal cortex (PC)
CL Item
Primary somatosensory cortex (S1C)
CL Item
Posterior superior temporal cortex (STC)
CL Item
Striatum (STR)
CL Item
Temporal cortex (TC)
CL Item
Upper (rostral) rhombic lip (URL)
CL Item
Primary visual cortex (V1C)
CL Item
Ventral forebrain (VF)
CL Item
Ventrolateral prefrontal cortex (VFC)
Item
Left or right hemisphere
text
C0228176 (UMLS CUI [1,1])
C0228175 (UMLS CUI [2,1])
Code List
Left or right hemisphere
CL Item
Left (L)
CL Item
Left or Right (too young to determine) (LR)
CL Item
Unkown (NA)
CL Item
Right (R)