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The dataset provides general demographic informaton, such as age, ethnicity, gender, size of subject's family (e.g. number of brothers/sisters), and age of disease onset. Other variables describe criteria used to assess and confirm disease status, and for female subjects, pregnancy/birthing history, e.g. number of live/still births, normal/tube pregancies, miscarriages, etc..

8 Formulieren  
pht002333
Beschrijving

pht002333

Subject ID
Beschrijving

subjid

Datatype

text

Alias
UMLS CUI [1,1]
C2348585
Subject's gender
Beschrijving

gender

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
Identifies ethnic classifications
Beschrijving

ethnic

Datatype

text

Alias
UMLS CUI [1,1]
C0015031
Represents racial background of the subject
Beschrijving

rcode

Datatype

string

Alias
UMLS CUI [1,1]
C0034510
Age at the time the whole blood sample was drawn
Beschrijving

bdage

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C3840506
UMLS CUI [1,2]
C2355654
Years
At time of disease onset less than 16 years old
Beschrijving

juve_onset

Datatype

text

Alias
UMLS CUI [1,1]
C0206132
Verifies if the case meets criteria for the diagnosis of scleroderma and medical records reviewed by the PI
Beschrijving

status_ver

Datatype

text

Alias
UMLS CUI [1,1]
C0679228
UMLS CUI [1,2]
C0011644
UMLS CUI [1,3]
C0730229
Identifies the type of scleroderma as 'limited' or 'diffuse' or 'sine' or 'unknown'
Beschrijving

ssctype

Datatype

text

Alias
UMLS CUI [1,1]
C0332307
UMLS CUI [1,2]
C0011644
UMLS CUI [1,3]
C0439801
UMLS CUI [1,4]
C0205219
UMLS CUI [1,5]
C0439673
Indicates whether the case fulfills the 1980 preliminary criteria for SSc with: no= does not meet criteria, 1= meets the major criterion, 2= meets at least 2 of 3 minor criteria This can be positive if the major or at least 2 of the minor criteria are present
Beschrijving

acr

Datatype

text

Alias
UMLS CUI [1,1]
C0011900
UMLS CUI [1,2]
C0243161
UMLS CUI [1,3]
C0036421
Number of CREST features documented in medical record
Beschrijving

crest

Datatype

text

Alias
UMLS CUI [1,1]
C0206138
UMLS CUI [1,2]
C0025102
Age at physician's diagnosis
Beschrijving

dis_diagag

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C1828181
Years
Age of subject at the onset of Raynaud's phenomenon
Beschrijving

rayonset

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C0206132
UMLS CUI [1,2]
C0034735
Years
Age of subject at the onset of first non-Raynaud's symptom
Beschrijving

nronsetage

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C1828300
UMLS CUI [1,2]
C0549184
UMLS CUI [1,3]
C0034735
Years
Number of pregnancies of female subject
Beschrijving

times_preg

Datatype

text

Alias
UMLS CUI [1,1]
C3812254
Number of live births of female subject
Beschrijving

qty_births

Datatype

text

Alias
UMLS CUI [1,1]
C2114488
Number of multiple births in a pregnancy
Beschrijving

mult_birth

Datatype

text

Alias
UMLS CUI [1,1]
C0026753
UMLS CUI [1,2]
C0032961
Number of pregnancy terminations
Beschrijving

preg_termi

Datatype

text

Alias
UMLS CUI [1,1]
C0429915
Number of miscarriages
Beschrijving

qty_lost

Datatype

text

Alias
UMLS CUI [1,1]
C0429916
Number of stillborns of female subjects
Beschrijving

stillborn

Datatype

text

Alias
UMLS CUI [1,1]
C0595939
UMLS CUI [1,2]
C0237753
Number of tubal pregnancies of female subjects
Beschrijving

tubal

Datatype

text

Alias
UMLS CUI [1,1]
C0032994
UMLS CUI [1,2]
C0237753
Number of brothers related to subject with the same mother and father
Beschrijving

bros_full

Datatype

text

Alias
UMLS CUI [1,1]
C0557095
UMLS CUI [1,2]
C0445247
UMLS CUI [1,3]
C0337494
UMLS CUI [1,4]
C0337486
Number of sisters related to subject with the same mother and father
Beschrijving

sis_full_q

Datatype

text

Alias
UMLS CUI [1,1]
C0557096
UMLS CUI [1,2]
C0445247
UMLS CUI [1,3]
C0337486
UMLS CUI [1,4]
C0337494
Number of half brothers related to subject with one mother or father in common
Beschrijving

bros_half

Datatype

text

Alias
UMLS CUI [1,1]
C0337505
UMLS CUI [1,2]
C0337527
UMLS CUI [1,3]
C0445247
UMLS CUI [1,4]
C0337494
UMLS CUI [1,5]
C0337486
Number of half sisters related to subject with one mother or father in common
Beschrijving

sis_half_q

Datatype

text

Alias
UMLS CUI [1,1]
C0337505
UMLS CUI [1,2]
C0337514
UMLS CUI [1,3]
C0445247
UMLS CUI [1,4]
C0337494
UMLS CUI [1,5]
C0337486
Total number of children (live births) of female subject
Beschrijving

child_tota

Datatype

text

Alias
UMLS CUI [1,1]
C2229974
Number of sons (live births) of female subjects
Beschrijving

qty_boys

Datatype

text

Alias
UMLS CUI [1,1]
C0237753
UMLS CUI [1,2]
C0037683
Number of daughters (live births) of female subjects
Beschrijving

qty_girls

Datatype

text

Alias
UMLS CUI [1,1]
C0237753
UMLS CUI [1,2]
C0086287
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Similar models

The dataset provides general demographic informaton, such as age, ethnicity, gender, size of subject's family (e.g. number of brothers/sisters), and age of disease onset. Other variables describe criteria used to assess and confirm disease status, and for female subjects, pregnancy/birthing history, e.g. number of live/still births, normal/tube pregancies, miscarriages, etc..

8 Formulieren
Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht002333
subjid
Item
Subject ID
text
C2348585 (UMLS CUI [1,1])
Item
Subject's gender
text
C0079399 (UMLS CUI [1,1])
gender
Code List
Subject's gender
CL Item
Unknown (9)
CL Item
Female (Female)
CL Item
Male (Male)
Item
Identifies ethnic classifications
text
C0015031 (UMLS CUI [1,1])
ethnic
Code List
Identifies ethnic classifications
CL Item
Non-Hispanic (1)
CL Item
Hispanic (2)
CL Item
Not reported (9)
rcode
Item
Represents racial background of the subject
string
C0034510 (UMLS CUI [1,1])
bdage
Item
Age at the time the whole blood sample was drawn
text
C3840506 (UMLS CUI [1,1])
C2355654 (UMLS CUI [1,2])
Item
At time of disease onset less than 16 years old
text
C0206132 (UMLS CUI [1,1])
juve_onset
Code List
At time of disease onset less than 16 years old
CL Item
Not noted (Blank)
CL Item
No (N)
CL Item
Yes (Y)
Item
Verifies if the case meets criteria for the diagnosis of scleroderma and medical records reviewed by the PI
text
C0679228 (UMLS CUI [1,1])
C0011644 (UMLS CUI [1,2])
C0730229 (UMLS CUI [1,3])
status_ver
Code List
Verifies if the case meets criteria for the diagnosis of scleroderma and medical records reviewed by the PI
CL Item
Yes (Yes)
Item
Identifies the type of scleroderma as 'limited' or 'diffuse' or 'sine' or 'unknown'
text
C0332307 (UMLS CUI [1,1])
C0011644 (UMLS CUI [1,2])
C0439801 (UMLS CUI [1,3])
C0205219 (UMLS CUI [1,4])
C0439673 (UMLS CUI [1,5])
ssctype
Code List
Identifies the type of scleroderma as 'limited' or 'diffuse' or 'sine' or 'unknown'
CL Item
Unknown (0)
CL Item
Limited (1)
CL Item
Diffuse (2)
CL Item
Unspecified (3)
CL Item
Sine (6)
Item
Indicates whether the case fulfills the 1980 preliminary criteria for SSc with: no= does not meet criteria, 1= meets the major criterion, 2= meets at least 2 of 3 minor criteria This can be positive if the major or at least 2 of the minor criteria are present
text
C0011900 (UMLS CUI [1,1])
C0243161 (UMLS CUI [1,2])
C0036421 (UMLS CUI [1,3])
acr
Code List
Indicates whether the case fulfills the 1980 preliminary criteria for SSc with: no= does not meet criteria, 1= meets the major criterion, 2= meets at least 2 of 3 minor criteria This can be positive if the major or at least 2 of the minor criteria are present
CL Item
No (N)
CL Item
Yes (Y)
crest
Item
Number of CREST features documented in medical record
text
C0206138 (UMLS CUI [1,1])
C0025102 (UMLS CUI [1,2])
dis_diagag
Item
Age at physician's diagnosis
text
C1828181 (UMLS CUI [1,1])
rayonset
Item
Age of subject at the onset of Raynaud's phenomenon
text
C0206132 (UMLS CUI [1,1])
C0034735 (UMLS CUI [1,2])
nronsetage
Item
Age of subject at the onset of first non-Raynaud's symptom
text
C1828300 (UMLS CUI [1,1])
C0549184 (UMLS CUI [1,2])
C0034735 (UMLS CUI [1,3])
times_preg
Item
Number of pregnancies of female subject
text
C3812254 (UMLS CUI [1,1])
qty_births
Item
Number of live births of female subject
text
C2114488 (UMLS CUI [1,1])
mult_birth
Item
Number of multiple births in a pregnancy
text
C0026753 (UMLS CUI [1,1])
C0032961 (UMLS CUI [1,2])
preg_termi
Item
Number of pregnancy terminations
text
C0429915 (UMLS CUI [1,1])
qty_lost
Item
Number of miscarriages
text
C0429916 (UMLS CUI [1,1])
stillborn
Item
Number of stillborns of female subjects
text
C0595939 (UMLS CUI [1,1])
C0237753 (UMLS CUI [1,2])
tubal
Item
Number of tubal pregnancies of female subjects
text
C0032994 (UMLS CUI [1,1])
C0237753 (UMLS CUI [1,2])
bros_full
Item
Number of brothers related to subject with the same mother and father
text
C0557095 (UMLS CUI [1,1])
C0445247 (UMLS CUI [1,2])
C0337494 (UMLS CUI [1,3])
C0337486 (UMLS CUI [1,4])
sis_full_q
Item
Number of sisters related to subject with the same mother and father
text
C0557096 (UMLS CUI [1,1])
C0445247 (UMLS CUI [1,2])
C0337486 (UMLS CUI [1,3])
C0337494 (UMLS CUI [1,4])
bros_half
Item
Number of half brothers related to subject with one mother or father in common
text
C0337505 (UMLS CUI [1,1])
C0337527 (UMLS CUI [1,2])
C0445247 (UMLS CUI [1,3])
C0337494 (UMLS CUI [1,4])
C0337486 (UMLS CUI [1,5])
sis_half_q
Item
Number of half sisters related to subject with one mother or father in common
text
C0337505 (UMLS CUI [1,1])
C0337514 (UMLS CUI [1,2])
C0445247 (UMLS CUI [1,3])
C0337494 (UMLS CUI [1,4])
C0337486 (UMLS CUI [1,5])
child_tota
Item
Total number of children (live births) of female subject
text
C2229974 (UMLS CUI [1,1])
qty_boys
Item
Number of sons (live births) of female subjects
text
C0237753 (UMLS CUI [1,1])
C0037683 (UMLS CUI [1,2])
qty_girls
Item
Number of daughters (live births) of female subjects
text
C0237753 (UMLS CUI [1,1])
C0086287 (UMLS CUI [1,2])
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