English

Imaging Analysis Technique and Results – Baseline

1 forms  
T2 LESIONS ANALYSIS
Description

T2 LESIONS ANALYSIS

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C0221198
UMLS CUI-3
C0024485
Study ID
Description

Study ID

Data type

integer

Alias
UMLS CUI [1]
C2826693
Study site name
Description

Study site name

Data type

text

Alias
UMLS CUI [1]
C2825164
Subject ID
Description

Subject ID

Data type

integer

Alias
UMLS CUI [1]
C2348585
Date of MRI
Description

Date of MRI

Data type

date

Alias
UMLS CUI [1,1]
C0011008
UMLS CUI [1,2]
C0024485
1) Total volume of brain lesions on T2W image (cc):
Description

volume brain lesions

Data type

float

Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0221505
2) Total T2 lesion counts:
Description

Number of lesions

Data type

text

Alias
UMLS CUI [1]
C0449791
3) Regional T2 lesion counts:
Description

Number of lesions regional

Data type

text

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
i. Number of periventricular lesions:
Description

Number of lesions regional periventricular lesions

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
UMLS CUI [1,3]
C3277690
ii. Number of juxtacortical lesions:
Description

Number of lesions regional juxtacortical lesions

Data type

integer

iii. Number of posterior fossa lesions:
Description

Number of lesions regional posterior fossa

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
UMLS CUI [1,3]
C1116439
iv. Number of cortical lesions:
Description

Number of lesions regional cortical

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
UMLS CUI [1,3]
C0007776
v. Number of thalamus lesions:
Description

Number of lesions regional thalamus

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
UMLS CUI [1,3]
C0039729
vi. Number of basal ganglia lesions:
Description

Number of lesions regional basal ganglia

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
UMLS CUI [1,3]
C0004781
vii. Number of other lesions whose type is not specified:
Description

Number of lesions regional

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0205147
4) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
If Other, please specify
Description

other

Data type

text

Alias
UMLS CUI [1]
C0205394
5) Image pulse sequence used (Mention all that apply: FLAIR; PD/T2W FSE; T2W SE; Other, specify):
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
6) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
7) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
8) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
9) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
GD-ENHANCING LESIONS ANALYSIS
Description

GD-ENHANCING LESIONS ANALYSIS

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C1333400
1) Total number of Gd-enhancing lesions:
Description

Number of lesions Gd-enhancing lesions

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C1333400
2) Total volume of Gd-enhancing lesions
Description

volume Gd-enhancing lesions

Data type

float

Measurement units
  • cc
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C1333400
cc
3) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
Please mention if other:
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
4) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
5) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
6) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
7) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
T1 HYPOINTENSE LESIONS ANALYSIS
Description

T1 HYPOINTENSE LESIONS ANALYSIS

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C0221198
UMLS CUI-3
C0024485
1) Total number of T1 hypointense lesions:
Description

Number of lesions

Data type

integer

Alias
UMLS CUI [1]
C0449791
2) Total volume of T1 hypointense lesions
Description

volume lesion

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0221198
ml
3) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
Please mention if other:
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
4) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
5) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
6) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
7) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
BRAIN VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2 (AND THE CORRESPONDING SUB-QUESTIONS), NOT BOTH
Description

BRAIN VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2 (AND THE CORRESPONDING SUB-QUESTIONS), NOT BOTH

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C1113695
1) a. Brain volume
Description

Brain volume

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1]
C1113695
ml
b. Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
c. Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
d. Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
e. In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
f. Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
2) a. Ventricular volume fraction:
Description

Volume fraction Ventricular

Data type

float

Alias
UMLS CUI [1,1]
C0560268
UMLS CUI [1,2]
C0007799
b. Brain volume fraction:
Description

Volume fraction brain

Data type

text

Alias
UMLS CUI [1,1]
C0560268
UMLS CUI [1,2]
C0006104
c. Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
d. Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
e. In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
f. Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
VENTRICULAR VOLUME ANALYSIS ANSWER QUESTION 1 OR 2 (AND THE CORRESPONDING SUB- QUESTIONS), BUT NOT BOTH
Description

VENTRICULAR VOLUME ANALYSIS ANSWER QUESTION 1 OR 2 (AND THE CORRESPONDING SUB- QUESTIONS), BUT NOT BOTH

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C1980012
1) a. Ventricular volume
Description

Ventricular volume

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1]
C1980012
ml
b. Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
c. Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
d. Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
e. In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
f. Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
2) a. Ventricular volume fraction:
Description

Volume fraction Ventricular

Data type

float

Alias
UMLS CUI [1,1]
C0560268
UMLS CUI [1,2]
C0007799
b. Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
c. Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
d. Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
e. In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
f. Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
GRAY MATTER VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2, BUT NOT BOTH, THEN PROCEED TO QUESTION 3
Description

GRAY MATTER VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2, BUT NOT BOTH, THEN PROCEED TO QUESTION 3

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C0018220
UMLS CUI-3
C0449468
1) Gray matter volume
Description

volume Gray matter

Data type

text

Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0018220
2) Gray matter volume fraction:
Description

volume fraction Gray matter

Data type

text

Alias
UMLS CUI [1,1]
C0560268
UMLS CUI [1,2]
C0018220
3) Image pulse sequence used:
Description

pulse sequence Image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
4) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
5) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
6) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
7) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
GRAY MATTER LESIONS ANALYSIS
Description

GRAY MATTER LESIONS ANALYSIS

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C0018220
UMLS CUI-3
C0221198
1) Total number of gray matter lesions:
Description

Number of lesion gray matter

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0018220
2) Total volume of gray matter lesions
Description

volume Gray matter

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0018220
ml
3) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
4) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
5) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
6) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
7) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
WHITE MATTER VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2, BUT NOT BOTH, THEN PROCEED TO QUESTION 3
Description

WHITE MATTER VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2, BUT NOT BOTH, THEN PROCEED TO QUESTION 3

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C0682708
UMLS CUI-3
C0449468
1) White matter volume
Description

volume White matter

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0682708
ml
2) White matter volume fraction:
Description

volume fraction White matter

Data type

text

Alias
UMLS CUI [1,1]
C0560268
UMLS CUI [1,2]
C0682708
3) White matter volume OR White matter volume fraction a. Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
b. Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
c. Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
d. In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
e. Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
f. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
REGIONAL BRAIN VOLUMETRIC ANALYSIS
Description

REGIONAL BRAIN VOLUMETRIC ANALYSIS

Alias
UMLS CUI-1
C3825502
UMLS CUI-2
C0006104
UMLS CUI-3
C0205147
1) Central cerebral volume
Description

volume cerebral

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0006104
ml
2) Cortical thickness
Description

Cortical thickness

Data type

float

Measurement units
  • mm
mm
3) Brain structure volumes a. Hippocampus
Description

volume Hippocampus

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0019564
ml
b. Thalamus
Description

volume Thalamus

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0039729
ml
Other regional volumetric analyses (COMPLETE AS MANY TIMES AS NEEDED):
Description

Other regional volumetric analyses (COMPLETE AS MANY TIMES AS NEEDED):

Alias
UMLS CUI-1
C3825502
1) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
a. If Brain structure volume, specify structure:
Description

volume brain

Data type

text

Alias
UMLS CUI [1,1]
C0449468
UMLS CUI [1,2]
C0006104
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
2) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
3) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
4) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
5) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
6) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
SPINAL CORD LESIONS ANALYSIS
Description

SPINAL CORD LESIONS ANALYSIS

Alias
UMLS CUI-1
C0936012
UMLS CUI-2
C0241224
1) Total number of spinal cord lesions:
Description

Number of lesion spinal cord lesions

Data type

integer

Alias
UMLS CUI [1,1]
C0449791
UMLS CUI [1,2]
C0241224
2) Spinal cord lesion region (Mention all that apply: C1-C7; T1-T12; L1-L5 ):
Description

region Spinal cord lesion

Data type

text

Alias
UMLS CUI [1,1]
C1515974
UMLS CUI [1,2]
C0241224
3) Spinal cord lesions location (mention all that apply: Anterior; Posterior; Lateral ):
Description

location Spinal cord lesions

Data type

text

Alias
UMLS CUI [1,1]
C0450429
UMLS CUI [1,2]
C0241224
4) Spinal cord area
Description

area Spinal cord

Data type

float

Measurement units
  • mm2
Alias
UMLS CUI [1,1]
C2586162
UMLS CUI [1,2]
C0037925
mm2
4) Spinal cord Volume
Description

Volume Spinal cord

Data type

float

Measurement units
  • ml
Alias
UMLS CUI [1,1]
C2700258
UMLS CUI [1,2]
C0037925
ml
5) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
6) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
7) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
8) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
9) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
10) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
SPINAL CORD VOLUME/CROSS-SECTIONAL AREA
Description

SPINAL CORD VOLUME/CROSS-SECTIONAL AREA

Alias
UMLS CUI-1
C0037925
UMLS CUI-2
C2700258
UMLS CUI-3
C2586162
1) Technique Used:
Description

Imaging technique

Data type

text

Alias
UMLS CUI [1]
C0079595
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
2) Image pulse sequence used:
Description

Pulse Sequence image

Data type

text

Alias
UMLS CUI [1,1]
C3828438
UMLS CUI [1,2]
C1704922
If other, please specify
Description

Other

Data type

text

Alias
UMLS CUI [1]
C0205394
3) Slice thickness
Description

Slice thickness

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1]
C3829566
mm
4) In slice resolution
Description

resolution image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C2699488
UMLS CUI [1,2]
C1704922
mm
5) Gap
Description

Gap image

Data type

float

Measurement units
  • mm
Alias
UMLS CUI [1,1]
C3887622
UMLS CUI [1,2]
C1704922
mm
6) Technique reference ( i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
Description

reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
Tissue Integrity Measures
Description

Tissue Integrity Measures

Alias
UMLS CUI-1
C0518718
UMLS CUI-2
C0079809
MTR
Description

magnetisation transfer imaging ratio

Data type

boolean

Alias
UMLS CUI [1,1]
C2584640
UMLS CUI [1,2]
C0456603
Sequence Type
Description

Sequence Type

Data type

text

Alias
UMLS CUI [1,1]
C1519249
UMLS CUI [1,2]
C0332307
Slice thickness
Description

Slice thickness

Data type

text

Alias
UMLS CUI [1]
C3829566
Technique Reference
Description

Reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
Whole Brain
Description

Brain

Data type

boolean

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

white matter Normal

Data type

boolean

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

Grey matter Normal

Data type

boolean

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Other Regional Measurements
Description

Measurements Other Regional

Data type

boolean

Alias
UMLS CUI [1,1]
C0242485
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0205147
DTI
Description

DTI

Data type

boolean

Alias
UMLS CUI [1]
C1537007
Sequence Type
Description

Sequence Type

Data type

text

Alias
UMLS CUI [1,1]
C1519249
UMLS CUI [1,2]
C0332307
Slice thickness
Description

Slice thickness

Data type

text

Alias
UMLS CUI [1]
C3829566
Technique Reference
Description

Reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
Whole Brain
Description

Whole Brain

Data type

boolean

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

Normal Appearing WM

Data type

boolean

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

Normal Appearing GM

Data type

boolean

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Other Regional Measurements
Description

Other Regional Measurements

Data type

boolean

Alias
UMLS CUI [1,1]
C0242485
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0205147
Spectroscopy
Description

Spectroscopy

Data type

boolean

Alias
UMLS CUI [1]
C1283206
Sequence Type
Description

Sequence Type

Data type

text

Alias
UMLS CUI [1,1]
C1519249
UMLS CUI [1,2]
C0332307
Slice thickness
Description

Slice thickness

Data type

text

Alias
UMLS CUI [1]
C3829566
Technique Reference
Description

Reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
Whole Brain
Description

Whole Brain

Data type

boolean

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

Normal Appearing WM

Data type

boolean

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

Normal Appearing GM

Data type

boolean

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Other Regional Measurements
Description

Other Regional Measurements

Data type

boolean

Alias
UMLS CUI [1,1]
C0242485
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0205147
Other
Description

Other

Data type

boolean

Alias
UMLS CUI [1]
C0205394
Sequence Type
Description

Sequence Type

Data type

text

Alias
UMLS CUI [1,1]
C1519249
UMLS CUI [1,2]
C0332307
Slice thickness
Description

Slice thickness

Data type

text

Alias
UMLS CUI [1]
C3829566
Technique Reference
Description

Reference Technique

Data type

text

Alias
UMLS CUI [1,1]
C0034925
UMLS CUI [1,2]
C0449851
Normal Appearing WM
Description

WM Normal Appearing

Data type

boolean

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

boolean

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Other Regional Measurements
Description

Other Regional Measurements

Data type

boolean

Alias
UMLS CUI [1,1]
C0242485
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0205147
MTR – specify units and values
Description

MTR – specify units and values

Alias
UMLS CUI-1
C2584640
UMLS CUI-2
C0456603
Mean MTR unit
Description

MTR Mean

Data type

boolean

Alias
UMLS CUI [1,1]
C2584640
UMLS CUI [1,2]
C0456603
UMLS CUI [1,3]
C0444504
Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
MTR histogram peak position unit
Description

MTR histogram peak position

Data type

text

Alias
UMLS CUI [1,1]
C2584640
UMLS CUI [1,2]
C0456603
UMLS CUI [1,3]
C2348974
UMLS CUI [1,4]
C0444505
UMLS CUI [1,5]
C0733755
Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
MTR histogram peak height unit
Description

MTR histogram peak height

Data type

text

Alias
UMLS CUI [1,1]
C2584640
UMLS CUI [1,2]
C0456603
UMLS CUI [1,3]
C2348974
UMLS CUI [1,4]
C0444505
UMLS CUI [1,5]
C0489786
Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
DTI – specify units and values
Description

DTI – specify units and values

Alias
UMLS CUI-1
C1537007
Mean FA unit
Description

Mean FA unit

Data type

text

Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Mean ADC unit
Description

Mean ADC unit

Data type

text

Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Mean axial diffusivity unit
Description

Mean axial diffusivity unit

Data type

text

Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
Mean radial diffusivity unit
Description

Mean radial diffusivity unit

Data type

text

Whole brain
Description

Whole brain

Data type

text

Alias
UMLS CUI [1]
C0006104
Normal Appearing WM
Description

WM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0682708
UMLS CUI [1,2]
C0205307
Normal Appearing GM
Description

GM Normal Appearing

Data type

text

Alias
UMLS CUI [1,1]
C0018220
UMLS CUI [1,2]
C0205307
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Similar models

Imaging Analysis Technique and Results – Baseline

1 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
T2 LESIONS ANALYSIS
C0936012 (UMLS CUI-1)
C0221198 (UMLS CUI-2)
C0024485 (UMLS CUI-3)
Study ID
Item
Study ID
integer
C2826693 (UMLS CUI [1])
Study site name
Item
Study site name
text
C2825164 (UMLS CUI [1])
Subject ID
Item
Subject ID
integer
C2348585 (UMLS CUI [1])
Date of MRI
Item
Date of MRI
date
C0011008 (UMLS CUI [1,1])
C0024485 (UMLS CUI [1,2])
volume brain lesions
Item
1) Total volume of brain lesions on T2W image (cc):
float
C0449468 (UMLS CUI [1,1])
C0221505 (UMLS CUI [1,2])
Number of lesions
Item
2) Total T2 lesion counts:
text
C0449791 (UMLS CUI [1])
Item
3) Regional T2 lesion counts:
text
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
undefined item
Code List
3) Regional T2 lesion counts:
CL Item
done (1)
CL Item
not done (2)
Number of lesions regional periventricular lesions
Item
i. Number of periventricular lesions:
integer
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
C3277690 (UMLS CUI [1,3])
Number of lesions regional juxtacortical lesions
Item
ii. Number of juxtacortical lesions:
integer
Number of lesions regional posterior fossa
Item
iii. Number of posterior fossa lesions:
integer
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
C1116439 (UMLS CUI [1,3])
Number of lesions regional cortical
Item
iv. Number of cortical lesions:
integer
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
C0007776 (UMLS CUI [1,3])
Number of lesions regional thalamus
Item
v. Number of thalamus lesions:
integer
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
C0039729 (UMLS CUI [1,3])
Number of lesions regional basal ganglia
Item
vi. Number of basal ganglia lesions:
integer
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
C0004781 (UMLS CUI [1,3])
Number of lesions regional
Item
vii. Number of other lesions whose type is not specified:
integer
C0449791 (UMLS CUI [1,1])
C0205147 (UMLS CUI [1,2])
Item
4) Technique Used:
text
C0079595 (UMLS CUI [1])
Imaging technique
Code List
4) Technique Used:
CL Item
Manual tracing  (1)
CL Item
Semi-automated (verified by experienced reader)  (2)
CL Item
Fully automated segmentation (verified by experienced reader)  (3)
CL Item
Other, specify: (4)
other
Item
If Other, please specify
text
C0205394 (UMLS CUI [1])
Pulse Sequence image
Item
5) Image pulse sequence used (Mention all that apply: FLAIR; PD/T2W FSE; T2W SE; Other, specify):
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Slice thickness
Item
6) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
7) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
8) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
9) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
GD-ENHANCING LESIONS ANALYSIS
C0936012 (UMLS CUI-1)
C1333400 (UMLS CUI-2)
Number of lesions Gd-enhancing lesions
Item
1) Total number of Gd-enhancing lesions:
integer
C0449791 (UMLS CUI [1,1])
C1333400 (UMLS CUI [1,2])
volume Gd-enhancing lesions
Item
2) Total volume of Gd-enhancing lesions
float
C0449468 (UMLS CUI [1,1])
C1333400 (UMLS CUI [1,2])
Item
3) Technique Used:
text
C0079595 (UMLS CUI [1])
Imaging technique
Code List
3) Technique Used:
CL Item
T1-weighted spin echo with contrast  (1)
CL Item
T1-weighted 3D gradient-echo with contrast  (2)
CL Item
Other, specify: (3)
Other
Item
Please mention if other:
text
C0205394 (UMLS CUI [1])
Pulse Sequence image
Item
4) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Slice thickness
Item
5) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
6) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
7) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
T1 HYPOINTENSE LESIONS ANALYSIS
C0936012 (UMLS CUI-1)
C0221198 (UMLS CUI-2)
C0024485 (UMLS CUI-3)
Number of lesions
Item
1) Total number of T1 hypointense lesions:
integer
C0449791 (UMLS CUI [1])
volume lesion
Item
2) Total volume of T1 hypointense lesions
float
C0449468 (UMLS CUI [1,1])
C0221198 (UMLS CUI [1,2])
Item
3) Technique Used:
text
C0079595 (UMLS CUI [1])
Imaging technique
Code List
3) Technique Used:
CL Item
Visual determination by experienced reader  (1)
CL Item
Semi-automated (calculated through software, verified by experienced reader)  (2)
CL Item
Fully automated segmentation and counting  (3)
CL Item
Other, specify: (4)
Other
Item
Please mention if other:
text
C0205394 (UMLS CUI [1])
Item
4) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
4) Image pulse sequence used:
CL Item
T1-weighted spin echo with contrast  (1)
CL Item
T1-weighted spin echo without contrast  (2)
CL Item
Other, specify: (3)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
5) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
6) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
7) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
BRAIN VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2 (AND THE CORRESPONDING SUB-QUESTIONS), NOT BOTH
C0936012 (UMLS CUI-1)
C1113695 (UMLS CUI-2)
Brain volume
Item
1) a. Brain volume
float
C1113695 (UMLS CUI [1])
Item
b. Technique Used:
text
C0079595 (UMLS CUI [1])
Imaging technique
Code List
b. Technique Used:
CL Item
Automated  (1)
CL Item
Semi-automated  (2)
CL Item
Manual (3)
Item
c. Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
c. Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
d. Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
e. In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
f. Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Volume fraction Ventricular
Item
2) a. Ventricular volume fraction:
float
C0560268 (UMLS CUI [1,1])
C0007799 (UMLS CUI [1,2])
Item
b. Brain volume fraction:
text
C0560268 (UMLS CUI [1,1])
C0006104 (UMLS CUI [1,2])
Volume fraction brain
Code List
b. Brain volume fraction:
CL Item
Automated  (1)
CL Item
Semi-automated  (2)
CL Item
Manual (3)
Item
c. Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
c. Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
d. Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
e. In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
f. Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
VENTRICULAR VOLUME ANALYSIS ANSWER QUESTION 1 OR 2 (AND THE CORRESPONDING SUB- QUESTIONS), BUT NOT BOTH
C0936012 (UMLS CUI-1)
C1980012 (UMLS CUI-2)
Ventricular volume
Item
1) a. Ventricular volume
float
C1980012 (UMLS CUI [1])
Item
b. Technique Used:
text
C0079595 (UMLS CUI [1])
Imaging technique
Code List
b. Technique Used:
CL Item
Automated  (1)
CL Item
Semi-automated  (2)
CL Item
Manual (3)
Item
c. Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
c. Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
d. Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
e. In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
f. Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Volume fraction Ventricular
Item
2) a. Ventricular volume fraction:
float
C0560268 (UMLS CUI [1,1])
C0007799 (UMLS CUI [1,2])
Item
b. Technique Used:
text
C0079595 (UMLS CUI [1])
Volume fraction brain
Code List
b. Technique Used:
CL Item
Automated  (1)
CL Item
Semi-automated  (2)
CL Item
Manual (3)
Item
c. Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
c. Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
d. Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
e. In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
f. Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
g. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
GRAY MATTER VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2, BUT NOT BOTH, THEN PROCEED TO QUESTION 3
C0936012 (UMLS CUI-1)
C0018220 (UMLS CUI-2)
C0449468 (UMLS CUI-3)
volume Gray matter
Item
1) Gray matter volume
text
C0449468 (UMLS CUI [1,1])
C0018220 (UMLS CUI [1,2])
volume fraction Gray matter
Item
2) Gray matter volume fraction:
text
C0560268 (UMLS CUI [1,1])
C0018220 (UMLS CUI [1,2])
Item
3) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
pulse sequence Image
Code List
3) Image pulse sequence used:
CL Item
Absolute gray matter volume (non-normalized)  (1)
CL Item
Absolute gray matter volume (normalized)  (2)
CL Item
Gray matter fraction  (3)
CL Item
Other, specify: (4)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Item
4) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
4) Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
5) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
6) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
7) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
GRAY MATTER LESIONS ANALYSIS
C0936012 (UMLS CUI-1)
C0018220 (UMLS CUI-2)
C0221198 (UMLS CUI-3)
Number of lesion gray matter
Item
1) Total number of gray matter lesions:
integer
C0449791 (UMLS CUI [1,1])
C0018220 (UMLS CUI [1,2])
volume Gray matter
Item
2) Total volume of gray matter lesions
float
C0449468 (UMLS CUI [1,1])
C0018220 (UMLS CUI [1,2])
Item
3) Technique Used:
text
C0079595 (UMLS CUI [1])
undefined item
Code List
3) Technique Used:
CL Item
Visual determination by experienced reader  (1)
CL Item
Semi-automated (calculated through software, verified by experienced reader)  (2)
CL Item
Fully automated segmentation, localization, and counting  (3)
CL Item
Other, specify: (4)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Item
4) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
4) Image pulse sequence used:
CL Item
FLAIR  (1)
CL Item
T1W 3D gradient-echo  (2)
CL Item
DIR  (3)
CL Item
PSIR  (4)
CL Item
Other, specify: (5)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
5) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
6) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
7) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
8) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
WHITE MATTER VOLUME ANALYSIS – ANSWER QUESTION 1 OR 2, BUT NOT BOTH, THEN PROCEED TO QUESTION 3
C0936012 (UMLS CUI-1)
C0682708 (UMLS CUI-2)
C0449468 (UMLS CUI-3)
volume White matter
Item
1) White matter volume
float
C0449468 (UMLS CUI [1,1])
C0682708 (UMLS CUI [1,2])
volume fraction White matter
Item
2) White matter volume fraction:
text
C0560268 (UMLS CUI [1,1])
C0682708 (UMLS CUI [1,2])
Item
3) White matter volume OR White matter volume fraction a. Technique Used:
text
C0079595 (UMLS CUI [1])
undefined item
Code List
3) White matter volume OR White matter volume fraction a. Technique Used:
CL Item
Absolute white matter volume (non-normalized)  (1)
CL Item
Absolute white matter volume (normalized)  (2)
CL Item
White matter fraction  (3)
CL Item
Other, specify (4)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Item
b. Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
b. Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
c. Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
d. In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
e. Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
f. Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
REGIONAL BRAIN VOLUMETRIC ANALYSIS
C3825502 (UMLS CUI-1)
C0006104 (UMLS CUI-2)
C0205147 (UMLS CUI-3)
volume cerebral
Item
1) Central cerebral volume
float
C0449468 (UMLS CUI [1,1])
C0006104 (UMLS CUI [1,2])
Cortical thickness
Item
2) Cortical thickness
float
volume Hippocampus
Item
3) Brain structure volumes a. Hippocampus
float
C0449468 (UMLS CUI [1,1])
C0019564 (UMLS CUI [1,2])
volume Thalamus
Item
b. Thalamus
float
C0449468 (UMLS CUI [1,1])
C0039729 (UMLS CUI [1,2])
Item Group
Other regional volumetric analyses (COMPLETE AS MANY TIMES AS NEEDED):
C3825502 (UMLS CUI-1)
Item
1) Technique Used:
text
C0079595 (UMLS CUI [1])
undefined item
Code List
1) Technique Used:
CL Item
Central cerebral volume  (1)
CL Item
Cortical thickness  (2)
CL Item
Brain structure volume (3)
Item
a. If Brain structure volume, specify structure:
text
C0449468 (UMLS CUI [1,1])
C0006104 (UMLS CUI [1,2])
undefined item
Code List
a. If Brain structure volume, specify structure:
CL Item
Hippocampus  (1)
CL Item
Thalamus  (2)
CL Item
Lobes  (3)
CL Item
Other, specify: (4)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Item
2) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
2) Image pulse sequence used:
CL Item
Dual echo PD/T2W SE  (1)
CL Item
FLAIR  (2)
CL Item
PD SE  (3)
CL Item
T2W SE  (4)
CL Item
T1W SE  (5)
CL Item
T1W 3D gradient-echo  (6)
CL Item
Other, specify: (7)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
3) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
4) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
5) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
6) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
SPINAL CORD LESIONS ANALYSIS
C0936012 (UMLS CUI-1)
C0241224 (UMLS CUI-2)
Number of lesion spinal cord lesions
Item
1) Total number of spinal cord lesions:
integer
C0449791 (UMLS CUI [1,1])
C0241224 (UMLS CUI [1,2])
region Spinal cord lesion
Item
2) Spinal cord lesion region (Mention all that apply: C1-C7; T1-T12; L1-L5 ):
text
C1515974 (UMLS CUI [1,1])
C0241224 (UMLS CUI [1,2])
location Spinal cord lesions
Item
3) Spinal cord lesions location (mention all that apply: Anterior; Posterior; Lateral ):
text
C0450429 (UMLS CUI [1,1])
C0241224 (UMLS CUI [1,2])
area Spinal cord
Item
4) Spinal cord area
float
C2586162 (UMLS CUI [1,1])
C0037925 (UMLS CUI [1,2])
Volume Spinal cord
Item
4) Spinal cord Volume
float
C2700258 (UMLS CUI [1,1])
C0037925 (UMLS CUI [1,2])
Item
5) Technique Used:
text
C0079595 (UMLS CUI [1])
undefined item
Code List
5) Technique Used:
CL Item
Visual determination by experienced reader  (1)
CL Item
Semi-automated (calculated through software, verified by experienced reader)  (2)
CL Item
Fully automated segmentation, localization and counting  (3)
CL Item
Other, specify: (4)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Item
6) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
6) Image pulse sequence used:
CL Item
T2-weighted (T2)  (1)
CL Item
Proton-density weighted (PD)  (2)
CL Item
Short tau inversion recovery (STIR)  (3)
CL Item
Other, specify: (4)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
7) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
8) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
9) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
10) Technique reference (i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
SPINAL CORD VOLUME/CROSS-SECTIONAL AREA
C0037925 (UMLS CUI-1)
C2700258 (UMLS CUI-2)
C2586162 (UMLS CUI-3)
Item
1) Technique Used:
text
C0079595 (UMLS CUI [1])
Imaging technique
Code List
1) Technique Used:
CL Item
Manual tracing by experienced reader  (1)
CL Item
Semi-automated (calculated through software, verified by experienced reader)  (2)
CL Item
Losseff – 3mm x 5 axial slices from C2-3 up  (3)
CL Item
Fully automated segmentation  (4)
CL Item
Other, specify: (5)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Item
2) Image pulse sequence used:
text
C3828438 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Pulse Sequence image
Code List
2) Image pulse sequence used:
CL Item
T2-weighted (T2)  (1)
CL Item
Proton-density weighted (PD)  (2)
CL Item
Short tau inversion recovery (STIR)  (3)
CL Item
T1W SE  (4)
CL Item
T1W 3D gradient-echo  (5)
CL Item
Other, specify: (6)
Other
Item
If other, please specify
text
C0205394 (UMLS CUI [1])
Slice thickness
Item
3) Slice thickness
float
C3829566 (UMLS CUI [1])
resolution image
Item
4) In slice resolution
float
C2699488 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
Gap image
Item
5) Gap
float
C3887622 (UMLS CUI [1,1])
C1704922 (UMLS CUI [1,2])
reference Technique
Item
6) Technique reference ( i.e. literature citation(s), MRI Acquisition Manual or Analysis Manual):
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Item Group
Tissue Integrity Measures
C0518718 (UMLS CUI-1)
C0079809 (UMLS CUI-2)
magnetisation transfer imaging ratio
Item
MTR
boolean
C2584640 (UMLS CUI [1,1])
C0456603 (UMLS CUI [1,2])
Sequence Type
Item
Sequence Type
text
C1519249 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
Slice thickness
Item
Slice thickness
text
C3829566 (UMLS CUI [1])
Reference Technique
Item
Technique Reference
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Brain
Item
Whole Brain
boolean
C0006104 (UMLS CUI [1])
white matter Normal
Item
Normal Appearing WM
boolean
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Grey matter Normal
Item
Normal Appearing GM
boolean
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Measurements Other Regional
Item
Other Regional Measurements
boolean
C0242485 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0205147 (UMLS CUI [1,3])
DTI
Item
DTI
boolean
C1537007 (UMLS CUI [1])
Sequence Type
Item
Sequence Type
text
C1519249 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
Slice thickness
Item
Slice thickness
text
C3829566 (UMLS CUI [1])
Reference Technique
Item
Technique Reference
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Whole Brain
Item
Whole Brain
boolean
C0006104 (UMLS CUI [1])
Normal Appearing WM
Item
Normal Appearing WM
boolean
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Normal Appearing GM
Item
Normal Appearing GM
boolean
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Other Regional Measurements
Item
Other Regional Measurements
boolean
C0242485 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0205147 (UMLS CUI [1,3])
Spectroscopy
Item
Spectroscopy
boolean
C1283206 (UMLS CUI [1])
Sequence Type
Item
Sequence Type
text
C1519249 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
Slice thickness
Item
Slice thickness
text
C3829566 (UMLS CUI [1])
Reference Technique
Item
Technique Reference
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
Whole Brain
Item
Whole Brain
boolean
C0006104 (UMLS CUI [1])
Normal Appearing WM
Item
Normal Appearing WM
boolean
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Normal Appearing GM
Item
Normal Appearing GM
boolean
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Other Regional Measurements
Item
Other Regional Measurements
boolean
C0242485 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0205147 (UMLS CUI [1,3])
Other
Item
Other
boolean
C0205394 (UMLS CUI [1])
Sequence Type
Item
Sequence Type
text
C1519249 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
Slice thickness
Item
Slice thickness
text
C3829566 (UMLS CUI [1])
Reference Technique
Item
Technique Reference
text
C0034925 (UMLS CUI [1,1])
C0449851 (UMLS CUI [1,2])
WM Normal Appearing
Item
Normal Appearing WM
boolean
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
boolean
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Other Regional Measurements
Item
Other Regional Measurements
boolean
C0242485 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0205147 (UMLS CUI [1,3])
Item Group
MTR – specify units and values
C2584640 (UMLS CUI-1)
C0456603 (UMLS CUI-2)
MTR Mean
Item
Mean MTR unit
boolean
C2584640 (UMLS CUI [1,1])
C0456603 (UMLS CUI [1,2])
C0444504 (UMLS CUI [1,3])
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
MTR histogram peak position
Item
MTR histogram peak position unit
text
C2584640 (UMLS CUI [1,1])
C0456603 (UMLS CUI [1,2])
C2348974 (UMLS CUI [1,3])
C0444505 (UMLS CUI [1,4])
C0733755 (UMLS CUI [1,5])
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
MTR histogram peak height
Item
MTR histogram peak height unit
text
C2584640 (UMLS CUI [1,1])
C0456603 (UMLS CUI [1,2])
C2348974 (UMLS CUI [1,3])
C0444505 (UMLS CUI [1,4])
C0489786 (UMLS CUI [1,5])
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Item Group
DTI – specify units and values
C1537007 (UMLS CUI-1)
Mean FA unit
Item
Mean FA unit
text
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Mean ADC unit
Item
Mean ADC unit
text
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Mean axial diffusivity unit
Item
Mean axial diffusivity unit
text
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
Mean radial diffusivity unit
Item
Mean radial diffusivity unit
text
Whole brain
Item
Whole brain
text
C0006104 (UMLS CUI [1])
WM Normal Appearing
Item
Normal Appearing WM
text
C0682708 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
GM Normal Appearing
Item
Normal Appearing GM
text
C0018220 (UMLS CUI [1,1])
C0205307 (UMLS CUI [1,2])
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