Screening number
Item
Patient's Screening Number
integer
C1710477 (UMLS CUI [1])
Specimen ID
Item
Specimen ID (from Pathology Report)
text
C0237753 (UMLS CUI [1,1])
C0600091 (UMLS CUI [1,2])
C0370003 (UMLS CUI [1,3])
Specimen
Item
Specimen received: Blocks:
integer
Specimen
Item
Specimen received: Slides:
integer
Date received
Item
Date received
date
C1514756 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
Specimen Number
Item
Number
integer
C0370003 (UMLS CUI [1,1])
C0237753 (UMLS CUI [1,2])
Technician
Item
Technician
text
C1556020 (UMLS CUI [1])
Item
Number of EGFr Gene copies or Amplification: Check the box that applies.
integer
C1512116 (UMLS CUI [1])
Code List
Number of EGFr Gene copies or Amplification: Check the box that applies.
CL Item
Disomy (≤ 2 copies of EGFr genes in > 90% of cells) (1)
CL Item
Low Trisomy (≤ 2 copies of EGFr genes in ≥ 40% of cells, 3 copies in 10% - 40% of cells, ≥ 4 copies in < 10% of cells) (2)
CL Item
High Trisomy (≤ 2 copies of EGFr genes in ≥ 40% of cells, 3 copies in ≥ 40% of cells, ≥ 4 copies in < 10% of cells) (3)
CL Item
Low Polysomy (≥ 4 copies of EGFr genes in 10% - 40% of cells) (4)
CL Item
High Polysomy (≥ 4 copies of EGFr genes in ≥ 40% of cells) (5)
CL Item
Amplification: a ratio of EGFr gene to chromosome 7of ≥ 2, OR (6)
CL Item
Amplification: 15 copies of EGFr gene per cell > 10% of analyzed tumor cells (7)
FISH Result
Item
RESULT: Ratio
text
C0162789 (UMLS CUI [1,1])
C1274040 (UMLS CUI [1,2])
Item
RESULT
integer
C0162789 (UMLS CUI [1,1])
C1274040 (UMLS CUI [1,2])
CL Item
Positive (Amplified or High Polysomy) (1)
CL Item
Negative (Not Amplified or Not High Polysomy) (2)
Additional Comments
Item
Comments
text
C1830770 (UMLS CUI [1])
Pathologist Signature
Item
Pathologist's Signature
text
C1519316 (UMLS CUI [1,1])
C0334866 (UMLS CUI [1,2])
Report Date
Item
Report Date
text
C1302584 (UMLS CUI [1])