Basic data

1 forms

StudyEvent: SE
1. Basic data

Name

Type

Description | Question | Decode (Coded Value)

Data type

Alias

Show identification of patient

Item Group

Dummy

Item

Dummy

text

Molecular genetics basic data

Item Group

Internal number of laboratory

Item

Internal number of laboratory

integer

Date of specimen collection

Item

Date of specimen collection

date

Center of analysis

Item

Center of analysis

integer

Freiburg Pavia

Code List

Center of analysis

CL Item

Freiburg (1)

CL Item

Pavia (2)

CL Item

Other (99)

Other center of analysis

Item

Other center of analysis

text

Tissue examined

Item

Tissue examined

integer

PB BM

Code List

Tissue examined

CL Item

PB (1)

CL Item

BM (2)

CL Item

Other (99)

PTPN11 mutation

Item

PTPN11 mutation

integer

NoYes

Code List

PTPN11 mutation

CL Item

No (1)

CL Item

Yes (2)

RAS mutation

Item

RAS mutation

integer

NoYes

Code List

RAS mutation

CL Item

No (1)

CL Item

Yes (2)

CBL mutation

Item

CBL mutation

integer

NoYes

Code List

CBL mutation

CL Item

No (1)

CL Item

Yes (2)

Other type of tissue

Item Group

Other type of examined tissue

Item

Other type of examined tissue

text

Examined cells and nucleic acid

Item Group

Nucleic acid examined

Item

Nucleic acid examined

integer

RNA DNA

Code List

Nucleic acid examined

CL Item

RNA (1)

CL Item

DNA (2)

Cells examined

Item

Cells examined

integer

MNC Ficoll

Code List

Cells examined

CL Item

MNC (1)

CL Item

Ficoll rest (granulocytes) (2)

CL Item

unfractionated (3)

CL Item

Other (99)

Cells examined other

Item

Other cells examined

text

PTPN11

Item Group

Result in exon 3

Item

Result in exon 3

integer

Negative/Positive

Code List

Result in exon 3

CL Item

Negative (1)

CL Item

Positive (2)

Result in exon 13

Item

Result in exon 13

integer

Negative/Positive

Code List

Result in exon 13

CL Item

Negative (1)

CL Item

Positive (2)

Other PTPN11 mutation

Item

Other PTPN11 mutation

integer

NoYes

Code List

Other PTPN11 mutation

CL Item

No (1)

CL Item

Yes (2)

PTPN11 mutation specified

Item

PTPN11 mutation specified

text

Germline mutation

Item

Germline mutation

integer

Negative/Positive

Code List

Germline mutation

CL Item

Negative (1)

CL Item

Positive (2)

Material used for germline mutation

Item

Material used for verification of germline mutation

integer

Germline mutation material

Code List

Material used for verification of germline mutation

CL Item

Buccal swab (1)

CL Item

Fibroblasts (2)

CL Item

Hair (3)

CL Item

Fingernail (4)

CL Item

Other (99)

Other type of material

Item

Other type of material

text

PTPN11 exon 3 details

Item Group

DNA mutation in exon 3

Item

DNA mutation in exon 3

text

Protein 1 in exon 3

Item

Protein 1 in exon 3

text

Protein 2 in exon 3

Item

Protein 2 in exon 3

integer

Protein 3 in exon 3

Item

Protein 3 in exon 3

text

PTPN11 Exon 13 details

Item Group

DNA mutation in exon 13

Item

DNA mutation in exon 13

text

Protein 1 in exon 13

Item

Protein 1 in exon 13

text

Protein 2 in exon 13

Item

Protein 2 in exon 13

integer

Protein 3 in exon 13

Item

Protein 3 in exon 13

text

RAS

Item Group

Mutation in KRAS exon 1

Item

Mutation in KRAS exon 1

integer

Negative/Positive

Code List

Mutation in KRAS exon 1

CL Item

Negative (1)

CL Item

Positive (2)

Mutation in KRAS exon 2

Item

Mutation in KRAS exon 2

integer

Negative/Positive

Code List

Mutation in KRAS exon 2

CL Item

Negative (1)

CL Item

Positive (2)

Mutation in NRAS exon 1

Item

Mutation in NRAS exon 1

integer

Negative/Positive

Code List

Mutation in NRAS exon 1

CL Item

Negative (1)

CL Item

Positive (2)

Mutation in NRAS exon 2

Item

Mutation in NRAS exon 2

integer

Negative/Positive

Code List

Mutation in NRAS exon 2

CL Item

Negative (1)

CL Item

Positive (2)

Germline mutation

Item

Germline mutation

integer

Negative/Positive

Code List

Germline mutation

CL Item

Negative (1)

CL Item

Positive (2)

Material used for germline mutation

Item

Material used for verification of germline mutation

integer

Germline mutation material

Code List

Material used for verification of germline mutation

CL Item

Buccal swab (1)

CL Item

Fibroblasts (2)

CL Item

Hair (3)

CL Item

Fingernail (4)

CL Item

Other (99)

Other type of material

Item

Other type of material

text

KRAS exon 1

Item Group

DNA mutation in KRAS exon 1

Item

DNA mutation in KRAS exon 1

text

Protein 1 in KRAS exon 1

Item

Protein 1 in KRAS exon 1

text

Protein 2 in KRAS exon 1

Item

Protein 2 in KRAS exon 1

integer

Protein 3 in KRAS exon 1

Item

Protein 3 in KRAS exon 1

text

KRAS exon 2

Item Group

DNA mutation in KRAS exon 2

Item

DNA mutation in KRAS exon 2

text

Protein 1 in KRAS exon 2

Item

Protein 1 in KRAS exon 2

text

Protein 2 in KRAS exon 2

Item

Protein 2 in KRAS exon 2

integer

Protein 3 in KRAS exon 2

Item

Protein 3 in KRAS exon 2

text

NRAS exon 1

Item Group

DNA mutation in NRAS exon 1

Item

DNA mutation in NRAS exon 1

text

Protein 1 in NRAS exon 1

Item

Protein 1 in NRAS exon 1

text

Protein 2 in NRAS exon 1

Item

Protein 2 in NRAS exon 1

integer

Protein 3 in NRAS exon 1

Item

Protein 3 in NRAS exon 1

text

NRAS exon 2

Item Group

DNA mutation in NRAS exon 2

Item

DNA mutation in NRAS exon 2

text

Protein 1 in NRAS exon 2

Item

Protein 1 in NRAS exon 2

text

Protein 2 in NRAS exon 2

Item

Protein 2 in NRAS exon 2

integer

Protein 3 in NRAS exon 2

Item

Protein 3 in NRAS exon 2

text

CBL

Item Group

Mutation in CBL exon 8

Item

Mutation in CBL exon 8

integer

Negative/Positive

Code List

Mutation in CBL exon 8

CL Item

Negative (1)

CL Item

Positive (2)

Mutation in CBL exon 9

Item

Mutation in CBL exon 9

integer

Negative/Positive

Code List

Mutation in CBL exon 9

CL Item

Negative (1)

CL Item

Positive (2)

Germline mutation

Item

Germline mutation

integer

Negative/Positive

Code List

Germline mutation

CL Item

Negative (1)

CL Item

Positive (2)

Material used for germline mutation

Item

Material used for verification of germline mutation

integer

Germline mutation material

Code List

Material used for verification of germline mutation

CL Item

Buccal swab (1)

CL Item

Fibroblasts (2)

CL Item

Hair (3)

CL Item

Fingernail (4)

CL Item

Other (99)

Other type of material

Item

Other type of material

text

CBL exon 8 details

Item Group

1st DNA mutation in exon 8

Item

1st DNA mutation in exon 8

text

2nd DNA mutation in exon 8

Item

2nd DNA mutation in exon 8

text

Protein 1 in CBL exon 8

Item

Protein 1 in CBL exon 8

text

Protein 2 in CBL exon 8

Item

Protein 2 in CBL exon 8

integer

Protein 3 in CBL exon 8

Item

Protein 3 in CBL exon 8

text

CBL exon 9 details

Item Group

1st DNA mutation in exon 9

Item

1st DNA mutation in exon 9

text

2nd DNA mutation in exon 9

Item

2nd DNA mutation in exon 9

text

Protein 1 in CBL exon 9

Item

Protein 1 in CBL exon 9

text

Protein 2 in CBL exon 9

Item

Protein 2 in CBL exon 9

integer

Protein 3 in CBL exon 9

Item

Protein 3 in CBL exon 9

text

Study centre specific data

Item Group

DHPLC

Item

DHPLC

integer

Negative/Positive

Code List

DHPLC

CL Item

Negative (1)

CL Item

Positive (2)

PTPN11 ambiguous peak

Item

PTPN11 ambiguous peak

integer

Ambiguous Peak

Code List

PTPN11 ambiguous peak

CL Item

Normal clone (1)

CL Item

Minor clone (2)

RAS ambiguous peak

Item

RAS ambiguous peak

integer

Ambiguous Peak

Code List

RAS ambiguous peak

CL Item

Normal clone (1)

CL Item

Minor clone (2)

CBL ambiguous peak

Item

CBL ambiguous peak

integer

Ambiguous Peak

Code List

CBL ambiguous peak

CL Item

Normal clone (1)

CL Item

Minor clone (2)

PTP Zygosity

Item

PTP Zygosity

integer

Zygosity

Code List

PTP Zygosity

CL Item

Homozygous (1)

CL Item

Heterozygous (2)

RAS Zygosity

Item

RAS Zygosity

integer

Zygosity

Code List

RAS Zygosity

CL Item

Homozygous (1)

CL Item

Heterozygous (2)

CBL Zygosity

Item

CBL Zygosity

integer

Zygosity

Code List

CBL Zygosity

CL Item

Homozygous (1)

CL Item

Heterozygous (2)

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