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This sample attributes table contains sample ID, body site where sample was collected, analyte type, genotype completion rate, heterozygosity rate, DNA concentration, and cohort membership.

7 forms  
pht009405
Description

pht009405

DNA concentration by Affymetrix
Description

Internal_Pico

Data type

float

Measurement units
  • ng/ul
Alias
UMLS CUI [1,1]
C0012854
UMLS CUI [1,2]
C1446561
ng/ul
Genotype completion rate
Description

Genotyping_CR

Data type

float

Measurement units
  • %
Alias
UMLS CUI [1,1]
C0017431
UMLS CUI [1,2]
C0805732
%
Heterozygosity rate
Description

Het_Rate

Data type

float

Measurement units
  • %
Alias
UMLS CUI [1,1]
C0019425
UMLS CUI [1,2]
C1521828
%
Sample unique identifier
Description

SAMPLE_ID

Data type

text

Alias
UMLS CUI [1,1]
C1299222
Cohort membership
Description

COH

Data type

string

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1512693
Analyte type of the biospecimen, DNA or RNA
Description

ANALYTE_TYPE

Data type

text

Alias
UMLS CUI [1,1]
C4744818
UMLS CUI [1,2]
C2347026
UMLS CUI [1,3]
C0012854
UMLS CUI [2,1]
C4744818
UMLS CUI [2,2]
C2347026
UMLS CUI [2,3]
C0035668
The body, tissue or fluid source of the biospecimen
Description

BODY_SITE

Data type

text

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0449416
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Similar models

This sample attributes table contains sample ID, body site where sample was collected, analyte type, genotype completion rate, heterozygosity rate, DNA concentration, and cohort membership.

7 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht009405
Internal_Pico
Item
DNA concentration by Affymetrix
float
C0012854 (UMLS CUI [1,1])
C1446561 (UMLS CUI [1,2])
Genotyping_CR
Item
Genotype completion rate
float
C0017431 (UMLS CUI [1,1])
C0805732 (UMLS CUI [1,2])
Het_Rate
Item
Heterozygosity rate
float
C0019425 (UMLS CUI [1,1])
C1521828 (UMLS CUI [1,2])
SAMPLE_ID
Item
Sample unique identifier
text
C1299222 (UMLS CUI [1,1])
Item
Cohort membership
string
C0599755 (UMLS CUI [1,1])
C1512693 (UMLS CUI [1,2])
COH
Code List
Cohort membership
CL Item
PKTWIN (TWN)
CL Item
SMOFAM (FAM)
Item
Analyte type of the biospecimen, DNA or RNA
text
C4744818 (UMLS CUI [1,1])
C2347026 (UMLS CUI [1,2])
C0012854 (UMLS CUI [1,3])
C4744818 (UMLS CUI [2,1])
C2347026 (UMLS CUI [2,2])
C0035668 (UMLS CUI [2,3])
ANALYTE_TYPE
Code List
Analyte type of the biospecimen, DNA or RNA
CL Item
DNA (DNA)
C0012854 (UMLS CUI [1,1])
Item
The body, tissue or fluid source of the biospecimen
text
C2347026 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
BODY_SITE
Code List
The body, tissue or fluid source of the biospecimen
CL Item
BLOOD (BLOOD)
C0178913 (UMLS CUI [1,1])
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