Anglais

This sample attributes table includes body site where sample was collected, analyte type, tumor status, sequencing center, funding source, TOPMed phase, project, and study name.

4 Formulaires  
pht004900
Description

pht004900

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPLE_ID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Type de données

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C4744818
Tumor Status
Description

IS_TUMOR

Type de données

text

Alias
UMLS CUI [1,1]
C0475752
Name of the center which conducted sequencing
Description

SEQUENCING_CENTER

Type de données

text

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1561491
Funding provided for sequencing
Description

FUNDING_SOURCE

Type de données

string

Alias
UMLS CUI [1,1]
C0243098
UMLS CUI [1,2]
C1561491
TOPMed Phase
Description

TOPMed_PHASE

Type de données

string

Alias
UMLS CUI [1,1]
C0205390
UMLS CUI [1,2]
C2603343
Type of project in the TOPMed Group
Description

TOPMed_PROJECT

Type de données

string

Alias
UMLS CUI [1,1]
C1709701
UMLS CUI [1,2]
C0332307
TOPMed-assigned short study name (1:1 with phs number)
Description

STUDY_NAME

Type de données

string

Alias
UMLS CUI [1,1]
C2986334
Retour au début de la page

Similar models

This sample attributes table includes body site where sample was collected, analyte type, tumor status, sequencing center, funding source, TOPMed phase, project, and study name.

4 Formulaires
Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht004900
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor Status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor Status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is Tumor (Y)
C0027651 (UMLS CUI [1,1])
Item
Name of the center which conducted sequencing
text
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1561491 (UMLS CUI [1,3])
SEQUENCING_CENTER
Code List
Name of the center which conducted sequencing
CL Item
Illumina (ILLUMINA)
CL Item
NY Genome Center (NYGC)
CL Item
University of Washington (UW)
FUNDING_SOURCE
Item
Funding provided for sequencing
string
C0243098 (UMLS CUI [1,1])
C1561491 (UMLS CUI [1,2])
TOPMed_PHASE
Item
TOPMed Phase
string
C0205390 (UMLS CUI [1,1])
C2603343 (UMLS CUI [1,2])
TOPMed_PROJECT
Item
Type of project in the TOPMed Group
string
C1709701 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
STUDY_NAME
Item
TOPMed-assigned short study name (1:1 with phs number)
string
C2986334 (UMLS CUI [1,1])
Retour au début de la page