Sample ID, tumor status of sample, histologic type of sample, location of tumor within of pancreas, tumor stage [pT, pN], presence of vascular invasion, presence of perineural growth, and analyte type of participants with pancreatic neuroendocrine tumors and involved in the "Whole Exome Sequencing of Pancreatic Neuroendocrine Tumors at The Human Genome Sequencing Center, Baylor College of Medicine (HGSC-BCM)" project.

pht004571
Description

pht004571

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Description

SAMPID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Tumor status of sample
Description

IS_TUMOR

Type de données

text

Alias
UMLS CUI [1,1]
C0475752
Cell or tissue type of sample
Description

HISTOLOGICAL_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0007634
UMLS CUI [1,3]
C0332307
UMLS CUI [1,4]
C0449560
UMLS CUI [1,5]
C1292533
Location of tumor within the pancreas
Description

Tumor_location

Type de données

string

Alias
UMLS CUI [1,1]
C0027651
UMLS CUI [1,2]
C0450429
UMLS CUI [1,3]
C0030274
Tumor stage of sample
Description

Overall_TNM_Stage

Type de données

string

Alias
UMLS CUI [1,1]
C1300072
Tumor grade of sample
Description

TUMOR_GRADE

Type de données

string

Alias
UMLS CUI [1,1]
C0919553
Pathological staging of sample (pT) based on tumor characteristics
Description

pT_staging

Type de données

string

Alias
UMLS CUI [1,1]
C0443276
UMLS CUI [1,2]
C1272834
Pathological staging of sample (pN) based on lymph node invasion
Description

pN_staging

Type de données

string

Alias
UMLS CUI [1,1]
C0443276
UMLS CUI [1,2]
C1272833
Presence of Vascular invasion
Description

Vascular_invasion

Type de données

string

Alias
UMLS CUI [1,1]
C1318569
Presence of Perineural growth
Description

Perineural_growth

Type de données

string

Alias
UMLS CUI [1,1]
C1300724
Analyte type
Description

ANALYTE_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C4744818
Presence of contamination
Description

Contamination

Type de données

text

Alias
UMLS CUI [1,1]
C2349974

Similar models

Sample ID, tumor status of sample, histologic type of sample, location of tumor within of pancreas, tumor stage [pT, pN], presence of vascular invasion, presence of perineural growth, and analyte type of participants with pancreatic neuroendocrine tumors and involved in the "Whole Exome Sequencing of Pancreatic Neuroendocrine Tumors at The Human Genome Sequencing Center, Baylor College of Medicine (HGSC-BCM)" project.

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht004571
C3846158 (UMLS CUI [1,1])
SAMPID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Item
Tumor status of sample
text
C0475752 (UMLS CUI [1,1])
Code List
Tumor status of sample
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is Tumor (Y)
C0027651 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
Cell or tissue type of sample
string
C2347026 (UMLS CUI [1,1])
C0007634 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
C0449560 (UMLS CUI [1,4])
C1292533 (UMLS CUI [1,5])
Tumor_location
Item
Location of tumor within the pancreas
string
C0027651 (UMLS CUI [1,1])
C0450429 (UMLS CUI [1,2])
C0030274 (UMLS CUI [1,3])
Overall_TNM_Stage
Item
Tumor stage of sample
string
C1300072 (UMLS CUI [1,1])
Item
Tumor grade of sample
string
C0919553 (UMLS CUI [1,1])
Code List
Tumor grade of sample
CL Item
Not Determined (ND)
pT_staging
Item
Pathological staging of sample (pT) based on tumor characteristics
string
C0443276 (UMLS CUI [1,1])
C1272834 (UMLS CUI [1,2])
Item
Pathological staging of sample (pN) based on lymph node invasion
string
C0443276 (UMLS CUI [1,1])
C1272833 (UMLS CUI [1,2])
Code List
Pathological staging of sample (pN) based on lymph node invasion
CL Item
No affected lymph nodes (N0)
CL Item
Affected lymph nodes (N1)
Item
Presence of Vascular invasion
string
C1318569 (UMLS CUI [1,1])
Code List
Presence of Vascular invasion
CL Item
Not Determined (ND)
Item
Presence of Perineural growth
string
C1300724 (UMLS CUI [1,1])
Code List
Presence of Perineural growth
CL Item
Not Determined (ND)
ANALYTE_TYPE
Item
Analyte type
string
C4744818 (UMLS CUI [1,1])
Contamination
Item
Presence of contamination
text
C2349974 (UMLS CUI [1,1])