English

Sample ID, superfamily, subject type, body site where sample was collected, tumor status, histological type of sample, and genotyping center of participants with or without Barrett's and esophageal adenocarcinoma and involved in the "Barrett's and Esophageal Adenocarcinoma Genetic Susceptibility Study (BEAGESS)" project.

5 forms  
pht004611
Description

pht004611

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPLE_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Family identifier for families that include half-sib-like relationships
Description

SUPERFAMILY

Data type

text

Alias
UMLS CUI [1,1]
C3669174
Subject type
Description

CASECNTL

Data type

text

Alias
UMLS CUI [1,1]
C2348569
Body site where sample was collected
Description

BODY_SITE

Data type

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C4744818
Is Tumor
Description

IS_TUMOR

Data type

text

Alias
UMLS CUI [1,1]
C0027651
Cell or tissue type or subtype of sample
Description

HISTOLOGICAL_TYPE

Data type

string

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0007634
UMLS CUI [1,3]
C0332307
UMLS CUI [2,1]
C2347026
UMLS CUI [2,2]
C0007634
UMLS CUI [2,3]
C0449560
UMLS CUI [3,1]
C1292533
UMLS CUI [3,2]
C0332307
UMLS CUI [4,1]
C1292533
UMLS CUI [4,2]
C0449560
Name of the center which conducted genotyping
Description

GENOTYPING_CENTER

Data type

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1285573
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Similar models

Sample ID, superfamily, subject type, body site where sample was collected, tumor status, histological type of sample, and genotyping center of participants with or without Barrett's and esophageal adenocarcinoma and involved in the "Barrett's and Esophageal Adenocarcinoma Genetic Susceptibility Study (BEAGESS)" project.

5 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht004611
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
SUPERFAMILY
Item
Family identifier for families that include half-sib-like relationships
text
C3669174 (UMLS CUI [1,1])
Item
Subject type
text
C2348569 (UMLS CUI [1,1])
CASECNTL
Code List
Subject type
CL Item
Barrett's esophagus (BE)
CL Item
control (CO)
C3274648 (UMLS CUI [1,1])
CL Item
Esophageal adenomcarcinoma (EA)
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
BODY_SITE
Code List
Body site where sample was collected
CL Item
BLOOD (BLOOD)
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
ANALYTE_TYPE
Code List
Analyte Type
CL Item
DNA (DNA)
Item
Is Tumor
text
C0027651 (UMLS CUI [1,1])
IS_TUMOR
Code List
Is Tumor
CL Item
No (N)
Item
Cell or tissue type or subtype of sample
string
C2347026 (UMLS CUI [1,1])
C0007634 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
C2347026 (UMLS CUI [2,1])
C0007634 (UMLS CUI [2,2])
C0449560 (UMLS CUI [2,3])
C1292533 (UMLS CUI [3,1])
C0332307 (UMLS CUI [3,2])
C1292533 (UMLS CUI [4,1])
C0449560 (UMLS CUI [4,2])
HISTOLOGICAL_TYPE
Code List
Cell or tissue type or subtype of sample
CL Item
BLOOD (BLOOD)
Item
Name of the center which conducted genotyping
string
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1285573 (UMLS CUI [1,3])
GENOTYPING_CENTER
Code List
Name of the center which conducted genotyping
CL Item
Fred Hutchinson Cancer Research Center (FHCRC)
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