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Sample ID, body site where sample was obtained, analyte type, tumor status of sample, histological type of sample, subject ID, sequencing method, and sequencing vendor of participants with fibrolamellar hepatocellular carcinoma and involved in the "Genomic Analysis of Fibrolamellar Hepatocellular Carcinoma" project.

4 Formulaires  
pht004329
Description

pht004329

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Description

SAMPLE_ID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Type de données

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Description

IS_TUMOR

Type de données

text

Alias
UMLS CUI [1,1]
C0475752
Cell or tissue type or subtype of sample
Description

HISTOLOGICAL_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C2347026
UMLS CUI [1,2]
C0007634
UMLS CUI [1,3]
C0332307
UMLS CUI [2,1]
C2347026
UMLS CUI [2,2]
C0007634
UMLS CUI [2,3]
C0449560
UMLS CUI [3,1]
C1292533
UMLS CUI [3,2]
C0332307
UMLS CUI [4,1]
C1292533
UMLS CUI [4,2]
C0449560
De-identified Subject ID from which the sample came from
Description

SUBJECT_ID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Sequencing method used to analyze the sample
Description

SEQ_METHOD

Type de données

string

Alias
UMLS CUI [1,1]
C1561491
UMLS CUI [1,2]
C0871511
Sequencing vendor
Description

SEQ_VENDOR

Type de données

string

Alias
UMLS CUI [1,1]
C1561491
UMLS CUI [1,2]
C0683757
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Similar models

Sample ID, body site where sample was obtained, analyte type, tumor status of sample, histological type of sample, subject ID, sequencing method, and sequencing vendor of participants with fibrolamellar hepatocellular carcinoma and involved in the "Genomic Analysis of Fibrolamellar Hepatocellular Carcinoma" project.

4 Formulaires
Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht004329
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is tumor (Y)
C0027651 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
Cell or tissue type or subtype of sample
string
C2347026 (UMLS CUI [1,1])
C0007634 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
C2347026 (UMLS CUI [2,1])
C0007634 (UMLS CUI [2,2])
C0449560 (UMLS CUI [2,3])
C1292533 (UMLS CUI [3,1])
C0332307 (UMLS CUI [3,2])
C1292533 (UMLS CUI [4,1])
C0449560 (UMLS CUI [4,2])
SUBJECT_ID
Item
De-identified Subject ID from which the sample came from
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Item
Sequencing method used to analyze the sample
string
C1561491 (UMLS CUI [1,1])
C0871511 (UMLS CUI [1,2])
SEQ_METHOD
Code List
Sequencing method used to analyze the sample
CL Item
RNA sequencing (RNAseq)
CL Item
whole exome sequencing (WES)
C3640077 (UMLS CUI [1,1])
CL Item
Whole genome sequencing (WGS)
C3640076 (UMLS CUI [1,1])
SEQ_VENDOR
Item
Sequencing vendor
string
C1561491 (UMLS CUI [1,1])
C0683757 (UMLS CUI [1,2])
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