This subject phenotype data table includes subject sex, race, age, year of enrollment, log2 antibody titers (n=18 variables; Assays: hemagglutination inhibition and neutralization; Antigens: H1N1, H3N2, FluB; Time: preimmune, 14 days, and 28 days).

  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. This subject consent data table contains subject IDs, consent group information, subject aliases, and affection status (all subjects are controls).
    3. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes the study/substudy (phs accession) that the sample belongs to and sample use.
    4. This subject phenotype data table includes subject sex, race, age, year of enrollment, log2 antibody titers (n=18 variables; Assays: hemagglutination inhibition and neutralization; Antigens: H1N1, H3N2, FluB; Time: preimmune, 14 days, and 28 days).
    5. This sample attributes data table includes body site where sample was collected, analyte type, and genotyping center.
    6. This sample GEO mapping data table includes a mapping of sample IDs to GEO accession IDs, and RNA IDs collected at each study visit.
    7. This subject phenotype data table includes subject sex, age, year of enrollment, receipt of seasonal influenza vaccine (n=3; 2008-2010), recipet of 2009 pH1N1 swine influenza vaccine, virus detected in nasal wash, antiviral drug taken by subjects, maximum oral temperature on first day of illness, duration of symptoms, and log2 antibody titers (n=4 variables; hemagglutination inhibition assay; Time: baseline, acute infection, convalescent, and spring).
    8. This sample attributes data table includes body site where sample was collected, analyte type, genotyping and sequencing centers, and sample collection date.
    9. This subject GEO mapping data table includes a mapping of subject IDs to GEO accession IDs, and RNA IDs collected different time points.
pht005092
Beschrijving

pht005092

Alias
UMLS CUI [1,1]
C3846158
De-identified Subject ID
Beschrijving

SUBJECT_ID

Datatype

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Gender of participant
Beschrijving

sex

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
Race of participant
Beschrijving

race

Datatype

string

Alias
UMLS CUI [1,1]
C0034510
Year of enrollment
Beschrijving

Year_Enrollment

Datatype

text

Alias
UMLS CUI [1,1]
C0439234
UMLS CUI [1,2]
C1516879
Subject age
Beschrijving

Age

Datatype

float

Maateenheden
  • years
Alias
UMLS CUI [1,1]
C0001779
years
Log2 antibody titer, hemagglutination inhibition assay; H1N1 antigen; preimmune
Beschrijving

HAI_H1N1Day0

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C4033624
UMLS CUI [1,5]
C0332152
UMLS CUI [1,6]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; H1N1 antigen; 14 days postimmunization
Beschrijving

HAI_H1N1Day14

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C4033624
UMLS CUI [1,5]
C4071839
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; H1N1 antigen; 28 days postimmunization
Beschrijving

HAI_H1N1Day28

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C4033624
UMLS CUI [1,5]
C1442465
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; H3N2 antigen; preimmune
Beschrijving

HAI_H3N2Day0

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C4033623
UMLS CUI [1,5]
C0332152
UMLS CUI [1,6]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; H3N2 antigen; 14 days postimmunization
Beschrijving

HAI_H3N2Day14

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C4033623
UMLS CUI [1,5]
C4071839
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; H3N2 antigen; 28 days postimmunization
Beschrijving

HAI_H3N2Day28

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C4033623
UMLS CUI [1,5]
C1442465
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; FluB antigen; preimmune
Beschrijving

HAI_FluBDay0

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C0003320
UMLS CUI [1,5]
C3846158
UMLS CUI [1,6]
C0332152
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; FluB antigen; 14 days postimmunization
Beschrijving

HAI_FluBDay14

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C0003320
UMLS CUI [1,5]
C3846158
UMLS CUI [1,6]
C4071839
UMLS CUI [1,7]
C0687676
UMLS CUI [1,8]
C0020971
titer
Log2 antibody titer, hemagglutination inhibition assay; FluB antigen; 28 days postimmunization
Beschrijving

HAI_FluBDay28

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0018904
UMLS CUI [1,4]
C3846158
UMLS CUI [1,5]
C0003320
UMLS CUI [1,6]
C1442465
UMLS CUI [1,7]
C0687676
UMLS CUI [1,8]
C0020971
titer
Log2 antibody titer, neutralization assay; H1N1 antigen; preimmune
Beschrijving

Neut_H1N1Day0

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C4033624
UMLS CUI [1,5]
C0332152
UMLS CUI [1,6]
C0020971
titer
Log2 antibody titer, neutralization assay; H1N1 antigen; 14 days postimmunization
Beschrijving

Neut_H1N1Day14

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C4033624
UMLS CUI [1,5]
C4071839
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, neutralization assay; H1N1 antigen; 28 days postimmunization
Beschrijving

Neut_H1N1Day28

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C4033624
UMLS CUI [1,5]
C1442465
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, neutralization assay; H3N2 antigen; preimmune
Beschrijving

Neut_H3N2Day0

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C4033623
UMLS CUI [1,5]
C0332152
UMLS CUI [1,6]
C0020971
titer
Log2 antibody titer, neutralization assay; H3N2 antigen; 14 days postimmunization
Beschrijving

Neut_H3N2Day14

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C4033623
UMLS CUI [1,5]
C4071839
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, neutralization assay; H3N2 antigen; 28 days postimmunization
Beschrijving

Neut_H3N2Day28

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C4033623
UMLS CUI [1,5]
C1442465
UMLS CUI [1,6]
C0687676
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, neutralization assay; FluB antigen; preimmune
Beschrijving

Neut_FluBDay0

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C0003320
UMLS CUI [1,5]
C3846158
UMLS CUI [1,6]
C0332152
UMLS CUI [1,7]
C0020971
titer
Log2 antibody titer, neutralization assay; FluB antigen; 14 days postimmunization
Beschrijving

Neut_FluBDay14

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C0003320
UMLS CUI [1,5]
C3846158
UMLS CUI [1,6]
C4071839
UMLS CUI [1,7]
C0687676
UMLS CUI [1,8]
C0020971
titer
Log2 antibody titer, neutralization assay; FluB antigen; 28 days postimmunization
Beschrijving

Neut_FluBDay28

Datatype

float

Maateenheden
  • titer
Alias
UMLS CUI [1,1]
C1883661
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C5706620
UMLS CUI [1,4]
C0003320
UMLS CUI [1,5]
C3846158
UMLS CUI [1,6]
C1442465
UMLS CUI [1,7]
C0687676
UMLS CUI [1,8]
C0020971
titer

Similar models

This subject phenotype data table includes subject sex, race, age, year of enrollment, log2 antibody titers (n=18 variables; Assays: hemagglutination inhibition and neutralization; Antigens: H1N1, H3N2, FluB; Time: preimmune, 14 days, and 28 days).

  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. This subject consent data table contains subject IDs, consent group information, subject aliases, and affection status (all subjects are controls).
    3. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes the study/substudy (phs accession) that the sample belongs to and sample use.
    4. This subject phenotype data table includes subject sex, race, age, year of enrollment, log2 antibody titers (n=18 variables; Assays: hemagglutination inhibition and neutralization; Antigens: H1N1, H3N2, FluB; Time: preimmune, 14 days, and 28 days).
    5. This sample attributes data table includes body site where sample was collected, analyte type, and genotyping center.
    6. This sample GEO mapping data table includes a mapping of sample IDs to GEO accession IDs, and RNA IDs collected at each study visit.
    7. This subject phenotype data table includes subject sex, age, year of enrollment, receipt of seasonal influenza vaccine (n=3; 2008-2010), recipet of 2009 pH1N1 swine influenza vaccine, virus detected in nasal wash, antiviral drug taken by subjects, maximum oral temperature on first day of illness, duration of symptoms, and log2 antibody titers (n=4 variables; hemagglutination inhibition assay; Time: baseline, acute infection, convalescent, and spring).
    8. This sample attributes data table includes body site where sample was collected, analyte type, genotyping and sequencing centers, and sample collection date.
    9. This subject GEO mapping data table includes a mapping of subject IDs to GEO accession IDs, and RNA IDs collected different time points.
Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht005092
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
De-identified Subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Gender of participant
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
race
Item
Race of participant
string
C0034510 (UMLS CUI [1,1])
Year_Enrollment
Item
Year of enrollment
text
C0439234 (UMLS CUI [1,1])
C1516879 (UMLS CUI [1,2])
Age
Item
Subject age
float
C0001779 (UMLS CUI [1,1])
HAI_H1N1Day0
Item
Log2 antibody titer, hemagglutination inhibition assay; H1N1 antigen; preimmune
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C4033624 (UMLS CUI [1,4])
C0332152 (UMLS CUI [1,5])
C0020971 (UMLS CUI [1,6])
HAI_H1N1Day14
Item
Log2 antibody titer, hemagglutination inhibition assay; H1N1 antigen; 14 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C4033624 (UMLS CUI [1,4])
C4071839 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
HAI_H1N1Day28
Item
Log2 antibody titer, hemagglutination inhibition assay; H1N1 antigen; 28 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C4033624 (UMLS CUI [1,4])
C1442465 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
HAI_H3N2Day0
Item
Log2 antibody titer, hemagglutination inhibition assay; H3N2 antigen; preimmune
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C4033623 (UMLS CUI [1,4])
C0332152 (UMLS CUI [1,5])
C0020971 (UMLS CUI [1,6])
HAI_H3N2Day14
Item
Log2 antibody titer, hemagglutination inhibition assay; H3N2 antigen; 14 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C4033623 (UMLS CUI [1,4])
C4071839 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
HAI_H3N2Day28
Item
Log2 antibody titer, hemagglutination inhibition assay; H3N2 antigen; 28 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C4033623 (UMLS CUI [1,4])
C1442465 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
HAI_FluBDay0
Item
Log2 antibody titer, hemagglutination inhibition assay; FluB antigen; preimmune
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C0003320 (UMLS CUI [1,4])
C3846158 (UMLS CUI [1,5])
C0332152 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
HAI_FluBDay14
Item
Log2 antibody titer, hemagglutination inhibition assay; FluB antigen; 14 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C0003320 (UMLS CUI [1,4])
C3846158 (UMLS CUI [1,5])
C4071839 (UMLS CUI [1,6])
C0687676 (UMLS CUI [1,7])
C0020971 (UMLS CUI [1,8])
HAI_FluBDay28
Item
Log2 antibody titer, hemagglutination inhibition assay; FluB antigen; 28 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0018904 (UMLS CUI [1,3])
C3846158 (UMLS CUI [1,4])
C0003320 (UMLS CUI [1,5])
C1442465 (UMLS CUI [1,6])
C0687676 (UMLS CUI [1,7])
C0020971 (UMLS CUI [1,8])
Neut_H1N1Day0
Item
Log2 antibody titer, neutralization assay; H1N1 antigen; preimmune
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C4033624 (UMLS CUI [1,4])
C0332152 (UMLS CUI [1,5])
C0020971 (UMLS CUI [1,6])
Neut_H1N1Day14
Item
Log2 antibody titer, neutralization assay; H1N1 antigen; 14 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C4033624 (UMLS CUI [1,4])
C4071839 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
Neut_H1N1Day28
Item
Log2 antibody titer, neutralization assay; H1N1 antigen; 28 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C4033624 (UMLS CUI [1,4])
C1442465 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
Neut_H3N2Day0
Item
Log2 antibody titer, neutralization assay; H3N2 antigen; preimmune
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C4033623 (UMLS CUI [1,4])
C0332152 (UMLS CUI [1,5])
C0020971 (UMLS CUI [1,6])
Neut_H3N2Day14
Item
Log2 antibody titer, neutralization assay; H3N2 antigen; 14 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C4033623 (UMLS CUI [1,4])
C4071839 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
Neut_H3N2Day28
Item
Log2 antibody titer, neutralization assay; H3N2 antigen; 28 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C4033623 (UMLS CUI [1,4])
C1442465 (UMLS CUI [1,5])
C0687676 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
Neut_FluBDay0
Item
Log2 antibody titer, neutralization assay; FluB antigen; preimmune
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C0003320 (UMLS CUI [1,4])
C3846158 (UMLS CUI [1,5])
C0332152 (UMLS CUI [1,6])
C0020971 (UMLS CUI [1,7])
Neut_FluBDay14
Item
Log2 antibody titer, neutralization assay; FluB antigen; 14 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C0003320 (UMLS CUI [1,4])
C3846158 (UMLS CUI [1,5])
C4071839 (UMLS CUI [1,6])
C0687676 (UMLS CUI [1,7])
C0020971 (UMLS CUI [1,8])
Neut_FluBDay28
Item
Log2 antibody titer, neutralization assay; FluB antigen; 28 days postimmunization
float
C1883661 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C5706620 (UMLS CUI [1,3])
C0003320 (UMLS CUI [1,4])
C3846158 (UMLS CUI [1,5])
C1442465 (UMLS CUI [1,6])
C0687676 (UMLS CUI [1,7])
C0020971 (UMLS CUI [1,8])