Inglés

The pedigree data table shows family relationships through family IDs, subject IDs, father IDs, mother IDs, twin IDs, gender, and second degree relationships.

6 formularios  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. The subject consent data table contains subject IDs, consent group information, and subject aliases.
    3. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs.
    4. This subject phenotype table includes subject's sex, age at blood draw, and phenotype study (Amish Family HAPI Heart Study, Amish Family Longevity Study, and Amish Family Wellness Study). The variables collected at baseline visit are anthropometric measures (n=5; weight, height, bmi, whr, and waist), age, myocardial infarction, T2D, stroke, pregnancy status, CAC score and age, IMT thickness and plaque, EKG measures (n=4; QRS, QT, PR, and heart rate), inflammatory markers (n=4, fibrinogen, CRP, IL-6, Lpa), blood pressure (n=2, SBP and DBP), fasting insulin and glucose measures, blood measurements (n=10; WBC, hemoglobin, hematocrit, RBC, and platelets), metabolic measures (n=5; creatine, LDL, HDL, triglycerides, and total cholesterol), lung capacity (n=2; FVC and FEV), medications (n=3; hypertension, T2D, and lipid), and smoking status.
    5. This sample attributes table includes body site where sample was collected, histological type, analyte type, tumor status, sequencing center, funding source, TOPMed phase, study name, and project.
    6. The pedigree data table shows family relationships through family IDs, subject IDs, father IDs, mother IDs, twin IDs, gender, and second degree relationships.
pht005768
Descripción

pht005768

Alias
UMLS CUI [1,1]
C3846158
Family ID
Descripción

FAMILY_ID

Tipo de datos

text

Alias
UMLS CUI [1,1]
C3669174
Unique Subject ID
Descripción

SUBJECT_ID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C2348585
Father's Subject ID
Descripción

FATHER

Tipo de datos

string

Alias
UMLS CUI [1,1]
C3669177
UMLS CUI [1,2]
C0030761
Mother's Subject ID
Descripción

MOTHER

Tipo de datos

string

Alias
UMLS CUI [1,1]
C3669352
UMLS CUI [1,2]
C0030761
Sex
Descripción

SEX

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0079399
Twin ID
Descripción

MZTWIN

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0041427
UMLS CUI [1,2]
C2348585
UMLS CUI [1,3]
C0030761
Individual has unidentified second degree relationship with at least one other pedigree that is not represented in the pedigree information given.
Descripción

DEGREE2

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0443298
UMLS CUI [1,2]
C0680204
UMLS CUI [1,3]
C0205427
UMLS CUI [1,4]
C0449788
UMLS CUI [1,5]
C0030761
UMLS CUI [1,6]
C1882932
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Similar models

The pedigree data table shows family relationships through family IDs, subject IDs, father IDs, mother IDs, twin IDs, gender, and second degree relationships.

6 formularios
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. The subject consent data table contains subject IDs, consent group information, and subject aliases.
    3. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs.
    4. This subject phenotype table includes subject's sex, age at blood draw, and phenotype study (Amish Family HAPI Heart Study, Amish Family Longevity Study, and Amish Family Wellness Study). The variables collected at baseline visit are anthropometric measures (n=5; weight, height, bmi, whr, and waist), age, myocardial infarction, T2D, stroke, pregnancy status, CAC score and age, IMT thickness and plaque, EKG measures (n=4; QRS, QT, PR, and heart rate), inflammatory markers (n=4, fibrinogen, CRP, IL-6, Lpa), blood pressure (n=2, SBP and DBP), fasting insulin and glucose measures, blood measurements (n=10; WBC, hemoglobin, hematocrit, RBC, and platelets), metabolic measures (n=5; creatine, LDL, HDL, triglycerides, and total cholesterol), lung capacity (n=2; FVC and FEV), medications (n=3; hypertension, T2D, and lipid), and smoking status.
    5. This sample attributes table includes body site where sample was collected, histological type, analyte type, tumor status, sequencing center, funding source, TOPMed phase, study name, and project.
    6. The pedigree data table shows family relationships through family IDs, subject IDs, father IDs, mother IDs, twin IDs, gender, and second degree relationships.
Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht005768
C3846158 (UMLS CUI [1,1])
FAMILY_ID
Item
Family ID
text
C3669174 (UMLS CUI [1,1])
SUBJECT_ID
Item
Unique Subject ID
string
C2348585 (UMLS CUI [1,1])
FATHER
Item
Father's Subject ID
string
C3669177 (UMLS CUI [1,1])
C0030761 (UMLS CUI [1,2])
MOTHER
Item
Mother's Subject ID
string
C3669352 (UMLS CUI [1,1])
C0030761 (UMLS CUI [1,2])
Item
Sex
text
C0079399 (UMLS CUI [1,1])
SEX
Code List
Sex
CL Item
male (1)
C0086582 (UMLS CUI [1,1])
CL Item
female (2)
C0086287 (UMLS CUI [1,1])
MZTWIN
Item
Twin ID
text
C0041427 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
C0030761 (UMLS CUI [1,3])
Item
Individual has unidentified second degree relationship with at least one other pedigree that is not represented in the pedigree information given.
text
C0443298 (UMLS CUI [1,1])
C0680204 (UMLS CUI [1,2])
C0205427 (UMLS CUI [1,3])
C0449788 (UMLS CUI [1,4])
C0030761 (UMLS CUI [1,5])
C1882932 (UMLS CUI [1,6])
DEGREE2
Code List
Individual has unidentified second degree relationship with at least one other pedigree that is not represented in the pedigree information given.
CL Item
0 (0)
C3846158 (UMLS CUI [1,1])
CL Item
1 (1)
C3846158 (UMLS CUI [1,1])
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