This subject phenotype table includes subject's sex, age at blood draw, and phenotype study (Amish Family HAPI Heart Study, Amish Family Longevity Study, and Amish Family Wellness Study). The variables collected at baseline visit are anthropometric measures (n=5; weight, height, bmi, whr, and waist), age, myocardial infarction, T2D, stroke, pregnancy status, CAC score and age, IMT thickness and plaque, EKG measures (n=4; QRS, QT, PR, and heart rate), inflammatory markers (n=4, fibrinogen, CRP, IL-6, Lpa), blood pressure (n=2, SBP and DBP), fasting insulin and glucose measures, blood measurements (n=10; WBC, hemoglobin, hematocrit, RBC, and platelets), metabolic measures (n=5; creatine, LDL, HDL, triglycerides, and total cholesterol), lung capacity (n=2; FVC and FEV), medications (n=3; hypertension, T2D, and lipid), and smoking status.

6 Formulieren

StudyEvent: SEV1

Name

Type

Description | Question | Decode (Coded Value)

Datatype

Alias

pht005002

Item Group

pht005002

C3846158 (UMLS CUI [1,1])

SUBJECT_ID

Item

De-identified Subject ID

string

C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])

baseline_study

Item

Phenotype study

text

C0031437 (UMLS CUI [1,1])
C0947630 (UMLS CUI [1,2])

baseline_study

Code List

Phenotype study

CL Item

Amish Family HAPI Heart Study (1)

C0238622 (UMLS CUI [1,1])
C0015576 (UMLS CUI [1,2])
C0489835 (UMLS CUI [1,3])

CL Item

Amish Family Wellness Study (3)

C0238622 (UMLS CUI [1,1])
C0015576 (UMLS CUI [1,2])
C5548226 (UMLS CUI [1,3])
C2603343 (UMLS CUI [1,4])

CL Item

Amish Family Longevity Study (2)

C0015576 (UMLS CUI [1,1])
C0238622 (UMLS CUI [1,2])
C2603343 (UMLS CUI [1,3])
C0023980 (UMLS CUI [1,4])

SEX

Item

Sex of participant

text

C0079399 (UMLS CUI [1,1])

SEX

Code List

Sex of participant

CL Item

Female (F)

C0086287 (UMLS CUI [1,1])

CL Item

Male (M)

C0086582 (UMLS CUI [1,1])

age_baseline

Item

Age at baseline study

text

C0001779 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])

age_at_dna

Item

Age at blood draw

float

C0001779 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0005834 (UMLS CUI [1,3])

pregnant_baseline

Item

Pregnant at baseline visit

text

C0032961 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

pregnant_baseline

Code List

Pregnant at baseline visit

CL Item

Yes (1)

C5399964 (UMLS CUI [1,1])

CL Item

Male (88)

C0086582 (UMLS CUI [1,1])

CL Item

No (0)

C1298908 (UMLS CUI [1,1])

weight_baseline

Item

Weight at baseline visit

float

C0005910 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

waist_baseline

Item

Waist circumference at baseline visit

float

C0455829 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

whr_baseline

Item

Waist hip ratio at baseline visit

float

C0205682 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

height_baseline

Item

Height at baseline visit

float

C0005890 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

bmi_baseline

Item

Body mass index at baseline visit

float

C1305855 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

mi_baseline

Item

Self report heart attack at baseline visit

text

C2700446 (UMLS CUI [1,1])
C0027051 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

mi_baseline

Code List

Self report heart attack at baseline visit

CL Item

Yes, self-reported mi history (1)

C2700446 (UMLS CUI [1,1])
C0027051 (UMLS CUI [1,2])
C0262926 (UMLS CUI [1,3])

CL Item

No history of mi (0)

C1298908 (UMLS CUI [1,1])
C0262926 (UMLS CUI [1,2])
C0027051 (UMLS CUI [1,3])

stroke_baseline

Item

Self report stroke at baseline visit

text

C2700446 (UMLS CUI [1,1])
C0038454 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

stroke_baseline

Code List

Self report stroke at baseline visit

CL Item

Yes, self-reported stroke history (1)

C1705108 (UMLS CUI [1,1])
C2700446 (UMLS CUI [1,2])
C0559159 (UMLS CUI [1,3])

CL Item

No history of stroke (0)

C1298908 (UMLS CUI [1,1])
C0559159 (UMLS CUI [1,2])

cac_agatston_score

Item

Coronary artery calcification score

float

C2825178 (UMLS CUI [1,1])

cac_score_age

Item

Age when CAC score was obtained

text

C0001779 (UMLS CUI [1,1])
C2825178 (UMLS CUI [1,2])

imt_mean_farwall_cca_baseline

Item

Carotid intima-media far wall thickness at baseline visit

float

C1442880 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C0545082 (UMLS CUI [1,3])
C1960466 (UMLS CUI [1,4])
C0242485 (UMLS CUI [1,5])

imt_anyplaque_baseline

Item

Any presence of carotid plaque as measured by IMT at baseline visit

text

C1442880 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C0545082 (UMLS CUI [1,3])
C0751633 (UMLS CUI [1,4])
C0242485 (UMLS CUI [1,5])

imt_anyplaque_baseline

Code List

Any presence of carotid plaque as measured by IMT at baseline visit

CL Item

Yes, presence of plaque in carotid artery (1)

C1705108 (UMLS CUI [1,1])
C0751633 (UMLS CUI [1,2])

CL Item

No presence of plaque in carotid artery (0)

C1298908 (UMLS CUI [1,1])
C0751633 (UMLS CUI [1,2])

current_smoker_baseline

Item

Current smoking status of participant at baseline visit

text

C1519386 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

current_smoker_baseline

Code List

Current smoking status of participant at baseline visit

CL Item

Currently Smoking (1)

C3241966 (UMLS CUI [1,1])

CL Item

Not Currently Smoking (0)

C0425311 (UMLS CUI [1,1])

fibrinogen_baseline

Item

Fibrinogen value at baseline visit

float

C2082368 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

crp_baseline

Item

CRP value at baseline visit

float

C4763419 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

il6_baseline

Item

IL6 value at baseline visit

float

C0919829 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

lpa_baseline

Item

Lipoprotein A value at baseline visit

text

C1096202 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

sbp_baseline

Item

Systolic blood pressure at baseline visit

text

C0871470 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

dbp_baseline

Item

Diastolic blood pressure at baseline visit

text

C0428883 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

htn_med_baseline

Item

Taking medication for hypertension at baseline visit

text

C0003364 (UMLS CUI [1,1])
C0240320 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

htn_med_baseline

Code List

Taking medication for hypertension at baseline visit

CL Item

Yes, taking prescription htn medication (1)

C1705108 (UMLS CUI [1,1])
C3843193 (UMLS CUI [1,2])
C0003364 (UMLS CUI [1,3])

CL Item

No htn medication (0)

C3661845 (UMLS CUI [1,1])
C0003364 (UMLS CUI [1,2])

t2diabetes_baseline

Item

Has Type 2 diabetes based on medication, self-report, fasting glucose at baseline visit

text

C4014362 (UMLS CUI [1,1])
C5426732 (UMLS CUI [1,2])
C4284232 (UMLS CUI [1,3])
C2700446 (UMLS CUI [1,4])
C0202045 (UMLS CUI [1,5])
C1442880 (UMLS CUI [1,6])
C1442488 (UMLS CUI [1,7])
C0545082 (UMLS CUI [1,8])

t2diabetes_baseline

Code List

Has Type 2 diabetes based on medication, self-report, fasting glucose at baseline visit

CL Item

Yes, has t2 diabetes by fasting glucose, medication, and/or self-report (1)

C4014362 (UMLS CUI [1,1])
C4284232 (UMLS CUI [1,2])
C0948681 (UMLS CUI [1,3])
C2700446 (UMLS CUI [1,4])

CL Item

No history of t2 diabetes (0)

C1298908 (UMLS CUI [1,1])
C0262926 (UMLS CUI [1,2])
C4014362 (UMLS CUI [1,3])

t2d_med_baseline

Item

Taking medication for type 2 diabetes at baseline visit

text

C5235038 (UMLS CUI [1,1])
C4014362 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

t2d_med_baseline

Code List

Taking medication for type 2 diabetes at baseline visit

CL Item

Yes, taking prescription t2diabetes medication (1)

C1705108 (UMLS CUI [1,1])
C5235038 (UMLS CUI [1,2])
C4014362 (UMLS CUI [1,3])

CL Item

No t2d medication (0)

C1298908 (UMLS CUI [1,1])
C5235038 (UMLS CUI [1,2])
C4014362 (UMLS CUI [1,3])

fastinsulin_baseline

Item

Fasting insulin value at baseline visit

float

C0202098 (UMLS CUI [1,1])
C0015663 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

fastglucose_baseline

Item

Fasting glucose value at baseline visit

float

C0428568 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

ekg_qrs_baseline

Item

QRS duration measured by electrocardiogram at baseline visit

text

C0429025 (UMLS CUI [1,1])
C1623258 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

ekg_qt_baseline

Item

QT interval measured by electrocardiogram at baseline visit

text

C1287082 (UMLS CUI [1,1])
C1623258 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

ekg_pr_baseline

Item

PR interval measured by electrocardiogram at baseline visit

text

C0429087 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

ekg_hr_baseline

Item

Heart rate measured by electrocardiogram at baseline visit

text

C0018810 (UMLS CUI [1,1])
C1623258 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

white_blood_cell_count_baseline

Item

White blood cell count value at baseline visit

float

C0427512 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

hemoglobin_baseline

Item

Hemoglobin value at baseline visit

float

C0518015 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

hematocrit_baseline

Item

Hematocrit value at baseline visit

float

C0518014 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

platelet_count_baseline

Item

Platelet count at baseline visit

text

C0032181 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

red_blood_cell_count_baseline

Item

Red blood cell count value at baseline visit

float

C0014772 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

neutrophils_baseline

Item

Neutrophils value at baseline visit

text

C0948762 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

monocytes_baseline

Item

Monocytes value at baseline visit

text

C0026473 (UMLS CUI [1,1])
C0750480 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

lymphocytes_baseline

Item

Lymphocytes value at baseline visit

text

C0200635 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

eosinophils_baseline

Item

Eosinophils value at baseline visit

text

C0200638 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

basophils_baseline

Item

Basophils value at baseline visit

text

C0200641 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

creatinine_baseline

Item

Serum creatinine value at baseline visit

float

C0201976 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

ldl_baseline

Item

LDL value as calculated by Friedewald equation at baseline visit

text

C0428474 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

hdl_baseline

Item

HDL value at baseline visit

text

C0392885 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

trigs_baseline

Item

Triglycerides value at baseline visit

text

C0202236 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

totchol_baseline

Item

Total cholesterol value at baseline visit

text

C1445957 (UMLS CUI [1,1])
C1442880 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C0545082 (UMLS CUI [1,4])

lipid_med_baseline

Item

Taking medication for hypercholesterolemia at baseline visit

text

C0020443 (UMLS CUI [1,1])
C4284232 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

lipid_med_baseline

Code List

Taking medication for hypercholesterolemia at baseline visit

CL Item

Yes, taking prescription lipid lowering medication (1)

C1705108 (UMLS CUI [1,1])
C0585943 (UMLS CUI [1,2])

CL Item

No lipid lowering medication (0)

C1298908 (UMLS CUI [1,1])
C0585943 (UMLS CUI [1,2])

fvc_pre_bd_baseline

Item

Forced vital capacity measured by spirometry at baseline visit

float

C3714541 (UMLS CUI [1,1])
C0037981 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

fev1_pre_bd_baseline

Item

Forced expiratory volume in 1 second measured by spirometry at baseline visit

float

C0429706 (UMLS CUI [1,1])
C0037981 (UMLS CUI [1,2])
C1442880 (UMLS CUI [1,3])
C1442488 (UMLS CUI [1,4])
C0545082 (UMLS CUI [1,5])

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