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This subject phenotype table contains subject ID, epithelium percentage and tumor infiltrating lymphocytes in sample tissues, gene expression principal components 1-14, case group, and affection status of the the subject in prostate cancer (PrCa). All subjects are low-grade PrCa patients but the examined samples are from normal prostate tissues.

5 Formulare  
pht005103
Beschreibung

pht005103

Alias
UMLS CUI [1,1]
C3846158
De-identified Subject ID
Beschreibung

SUBJECT_ID

Datentyp

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Percent epithelium in sample tissue
Beschreibung

epithelium

Datentyp

text

Alias
UMLS CUI [1,1]
C0439165
UMLS CUI [1,2]
C0014609
UMLS CUI [1,3]
C1292533
Tumor-infiltrating lymphocytes in sample tissue
Beschreibung

tils

Datentyp

text

Alias
UMLS CUI [1,1]
C0079722
UMLS CUI [1,2]
C0475358
Case group
Beschreibung

Group

Datentyp

string

Alias
UMLS CUI [1,1]
C1698493
Gene expression principal component #1
Beschreibung

PC1

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #2
Beschreibung

PC2

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #3
Beschreibung

PC3

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #4
Beschreibung

PC4

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #5
Beschreibung

PC5

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #6
Beschreibung

PC6

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #7
Beschreibung

PC7

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #8
Beschreibung

PC8

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #9
Beschreibung

PC9

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #10
Beschreibung

PC10

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #11
Beschreibung

PC11

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #12
Beschreibung

PC12

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #13
Beschreibung

PC13

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Gene expression principal component #14
Beschreibung

PC14

Datentyp

float

Alias
UMLS CUI [1,1]
C0017262
UMLS CUI [1,2]
C1882460
UMLS CUI [1,3]
C0449788
Indicates the presence of prostate cancer in the subject
Beschreibung

AFFECTION_STATUS

Datentyp

text

Alias
UMLS CUI [1,1]
C0600139
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Ähnliche Modelle

This subject phenotype table contains subject ID, epithelium percentage and tumor infiltrating lymphocytes in sample tissues, gene expression principal components 1-14, case group, and affection status of the the subject in prostate cancer (PrCa). All subjects are low-grade PrCa patients but the examined samples are from normal prostate tissues.

5 Formulare
Name
Typ
Description | Question | Decode (Coded Value)
Datentyp
Alias
Item Group
pht005103
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
De-identified Subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Percent epithelium in sample tissue
text
C0439165 (UMLS CUI [1,1])
C0014609 (UMLS CUI [1,2])
C1292533 (UMLS CUI [1,3])
epithelium
Code List
Percent epithelium in sample tissue
CL Item
40% (40)
CL Item
50% (50)
CL Item
60% (60)
CL Item
70%+ (70)
Item
Tumor-infiltrating lymphocytes in sample tissue
text
C0079722 (UMLS CUI [1,1])
C0475358 (UMLS CUI [1,2])
tils
Code List
Tumor-infiltrating lymphocytes in sample tissue
CL Item
no (0)
CL Item
yes (1)
Group
Item
Case group
string
C1698493 (UMLS CUI [1,1])
PC1
Item
Gene expression principal component #1
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC2
Item
Gene expression principal component #2
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC3
Item
Gene expression principal component #3
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC4
Item
Gene expression principal component #4
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC5
Item
Gene expression principal component #5
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC6
Item
Gene expression principal component #6
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC7
Item
Gene expression principal component #7
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC8
Item
Gene expression principal component #8
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC9
Item
Gene expression principal component #9
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC10
Item
Gene expression principal component #10
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC11
Item
Gene expression principal component #11
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC12
Item
Gene expression principal component #12
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC13
Item
Gene expression principal component #13
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
PC14
Item
Gene expression principal component #14
float
C0017262 (UMLS CUI [1,1])
C1882460 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
Item
Indicates the presence of prostate cancer in the subject
text
C0600139 (UMLS CUI [1,1])
AFFECTION_STATUS
Code List
Indicates the presence of prostate cancer in the subject
CL Item
prostate cancer (1)
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