Anglais

The sample attributes table includes body site where sample was collected, analyte type, tumor status, and genotyping center.

6 Formulaires  
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. The subject consent file includes subject IDs and their consent group information.
    3. The pedigree table includes family ID, subject ID, father and mother ID, and subject gender, to link subjects of the same family.
    4. This subject sample mapping file contains a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
    5. The subject phenotype table includes age, sex, race, visit number, BMI, hypertension status (n=4 variables; self-reported, measured blood pressure, and medication), diabetic status (n=2 variables; glucose levels and medication), lipid measurements (n=4 variables; TC, TG, HDL, and LDL), cbc measurements (n=23 variables), whole blood measurements (n=22 variables; arachidonic acid, ADP/ATP, collagen/epineprhine/thromboxane B2, aggregation, all corrected for platelet counts), platelet rich plasma measurements (n=47 variables; arachidonic acid, ADP/ATP, collagen/epineprhine/thromboxane B2, aggregation, all corrected for platelet counts), urine measurements (n=1 variable; thromboxane B2 adjusted for urinary creatinine), and current smoking status.
    6. The sample attributes table includes body site where sample was collected, analyte type, tumor status, and genotyping center.
pht005343
Description

pht005343

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Description

SAMPLE_ID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Type de données

string

Alias
UMLS CUI [1,1]
C0449705
Analyte Type
Description

ANALYTE_TYPE

Type de données

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Description

IS_TUMOR

Type de données

text

Alias
UMLS CUI [1,1]
C0475752
Name of the center which conducted genotyping
Description

GENOTYPING_CENTER

Type de données

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C5575037
UMLS CUI [1,3]
C1285573
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Similar models

The sample attributes table includes body site where sample was collected, analyte type, tumor status, and genotyping center.

6 Formulaires
  1. StudyEvent: SEV1
    1. Eligibility Criteria
    2. The subject consent file includes subject IDs and their consent group information.
    3. The pedigree table includes family ID, subject ID, father and mother ID, and subject gender, to link subjects of the same family.
    4. This subject sample mapping file contains a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
    5. The subject phenotype table includes age, sex, race, visit number, BMI, hypertension status (n=4 variables; self-reported, measured blood pressure, and medication), diabetic status (n=2 variables; glucose levels and medication), lipid measurements (n=4 variables; TC, TG, HDL, and LDL), cbc measurements (n=23 variables), whole blood measurements (n=22 variables; arachidonic acid, ADP/ATP, collagen/epineprhine/thromboxane B2, aggregation, all corrected for platelet counts), platelet rich plasma measurements (n=47 variables; arachidonic acid, ADP/ATP, collagen/epineprhine/thromboxane B2, aggregation, all corrected for platelet counts), urine measurements (n=1 variable; thromboxane B2 adjusted for urinary creatinine), and current smoking status.
    6. The sample attributes table includes body site where sample was collected, analyte type, tumor status, and genotyping center.
Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht005343
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte Type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
IS_TUMOR
Code List
Tumor status
CL Item
unknown (unknown)
GENOTYPING_CENTER
Item
Name of the center which conducted genotyping
string
C1301943 (UMLS CUI [1,1])
C5575037 (UMLS CUI [1,2])
C1285573 (UMLS CUI [1,3])
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