English

This subject phenotype table contains subject IDs, sample batch, age, sex, flag for imputation of day of birth, flag for imputation of day saliva sample was produced on 2008 and 2011 collections, item response theory (IRT) cognitive score, and birth year.

4 forms  
pht005805
Description

pht005805

Alias
UMLS CUI [1,1]
C3846158
Subject level ID
Description

SUBJECT_ID

Data type

string

Alias
UMLS CUI [1,1]
C2348585
Sample batch (Year/Batch when the sample was collected)
Description

Sample_Batch

Data type

text

Alias
UMLS CUI [1,1]
C0370003
UMLS CUI [1,2]
C3641829
Age at saliva collection (2 digit integer measuring years); winsorized for ages > 89 or < 49
Description

age

Data type

text

Measurement units
  • years
Alias
UMLS CUI [1,1]
C0001779
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0438730
UMLS CUI [1,4]
C1516698
years
Genetic sex
Description

sex

Data type

text

Alias
UMLS CUI [1,1]
C0314603
UMLS CUI [1,2]
C0079399
Flag for imputation of day of birth
Description

bdflag

Data type

text

Alias
UMLS CUI [1,1]
C1708067
UMLS CUI [1,2]
C2699638
UMLS CUI [1,3]
C2826645
Flag for imputation of day saliva sample was produced, based on the 2008 collection effort
Description

s08flag

Data type

text

Alias
UMLS CUI [1,1]
C1708067
UMLS CUI [1,2]
C2699638
UMLS CUI [1,3]
C0011008
UMLS CUI [1,4]
C0438730
UMLS CUI [1,5]
C1516698
UMLS CUI [1,6]
C0441833
Flag for imputation of day saliva sample was produced, based on the 2011 collection effort
Description

s11flag

Data type

text

Alias
UMLS CUI [1,1]
C1708067
UMLS CUI [1,2]
C2699638
UMLS CUI [1,3]
C0011008
UMLS CUI [1,4]
C0438730
UMLS CUI [1,5]
C1516698
UMLS CUI [1,6]
C0441833
IRT cognitive score
Description

theta

Data type

float

Alias
UMLS CUI [1,1]
C0870753
UMLS CUI [1,2]
C0449820
Birth year. years 1918-1922 and 1959-1964 have each been combined into one group
Description

yrbirth

Data type

text

Alias
UMLS CUI [1,1]
C2826771
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Similar models

This subject phenotype table contains subject IDs, sample batch, age, sex, flag for imputation of day of birth, flag for imputation of day saliva sample was produced on 2008 and 2011 collections, item response theory (IRT) cognitive score, and birth year.

4 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht005805
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
Subject level ID
string
C2348585 (UMLS CUI [1,1])
Item
Sample batch (Year/Batch when the sample was collected)
text
C0370003 (UMLS CUI [1,1])
C3641829 (UMLS CUI [1,2])
Sample_Batch
Code List
Sample batch (Year/Batch when the sample was collected)
CL Item
2008-2009 mail collection (1)
CL Item
2011-2013 requested during in-person interview (2)
age
Item
Age at saliva collection (2 digit integer measuring years); winsorized for ages > 89 or < 49
text
C0001779 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0438730 (UMLS CUI [1,3])
C1516698 (UMLS CUI [1,4])
Item
Genetic sex
text
C0314603 (UMLS CUI [1,1])
C0079399 (UMLS CUI [1,2])
sex
Code List
Genetic sex
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
Item
Flag for imputation of day of birth
text
C1708067 (UMLS CUI [1,1])
C2699638 (UMLS CUI [1,2])
C2826645 (UMLS CUI [1,3])
bdflag
Code List
Flag for imputation of day of birth
CL Item
not imputed (0)
CL Item
imputed (1)
Item
Flag for imputation of day saliva sample was produced, based on the 2008 collection effort
text
C1708067 (UMLS CUI [1,1])
C2699638 (UMLS CUI [1,2])
C0011008 (UMLS CUI [1,3])
C0438730 (UMLS CUI [1,4])
C1516698 (UMLS CUI [1,5])
C0441833 (UMLS CUI [1,6])
s08flag
Code List
Flag for imputation of day saliva sample was produced, based on the 2008 collection effort
CL Item
not imputed (0)
CL Item
imputed (1)
Item
Flag for imputation of day saliva sample was produced, based on the 2011 collection effort
text
C1708067 (UMLS CUI [1,1])
C2699638 (UMLS CUI [1,2])
C0011008 (UMLS CUI [1,3])
C0438730 (UMLS CUI [1,4])
C1516698 (UMLS CUI [1,5])
C0441833 (UMLS CUI [1,6])
s11flag
Code List
Flag for imputation of day saliva sample was produced, based on the 2011 collection effort
CL Item
not imputed (0)
CL Item
imputed (1)
theta
Item
IRT cognitive score
float
C0870753 (UMLS CUI [1,1])
C0449820 (UMLS CUI [1,2])
yrbirth
Item
Birth year. years 1918-1922 and 1959-1964 have each been combined into one group
text
C2826771 (UMLS CUI [1,1])
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